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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107937625   ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial 
 ghi-r.1   107904258   ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial 
 ghi-r.1   107929944   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial 
 ghi-r.1   107893400   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial 
 ath-u.5   ftsh4   FTSH protease 4 
 ath-u.5   FTSH11   FTSH protease 11 
 bra-r.6   103842161   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial 
 bra-r.6   103844798   ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial 
 bra-r.6   103852050   ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial 
 bna-r.1   125592956   ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial-like 
 bna-r.1   106368543   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like 
 bna-r.1   106391749   ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial 
 cit-r.1   102621961   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial 
 cit-r.1   102607606   ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial 
 gma-u.5   100815980   ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial 
 gma-u.5   100814187   ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial-like 
 gma-u.5   100808349   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial 
 vvi-u.5   100252645   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial 
 vvi-u.5   100250114   ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial 
 ppo-u.5   7470693   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial 
 ppo-u.5   7485221   ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial 
 ppo-u.5   7475612   ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial 
 mtr-u.5   11421454   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial 
 mtr-u.5   11433616   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial 
 mtr-u.5   11434270   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial 
 sly-u.5   101257288   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial 
 sly-u.5   101252055   ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial 
 sly-u.5   543882   putative FtsH protease 
 sot-r.1   102591239   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like 
 sot-r.1   102582577   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like 
 sot-r.1   102585612   ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial 
 nta-r.1   107830288   ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial 
 nta-r.1   107768422   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like 
 nta-r.1   107804496   ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial 
 osa-u.5   4326617   ATP-dependent zinc metalloprotease FTSH 9, chloroplastic/mitochondrial-like 
 osa-u.5   4326311   ATP-dependent zinc metalloprotease FTSH 5, mitochondrial-like 
 osa-u.5   4326310   ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like 
 zma-u.5   100382151   uncharacterized LOC100382151 
 zma-u.5   103635431   ATP-dependent zinc metalloprotease FTSH 5, mitochondrial 
 zma-u.5   100384366   ATP-dependent zinc metalloprotease FTSH 4 mitochondrial 
 tae-r.2   123087720   ATP-dependent zinc metalloprotease FTSH 5, mitochondrial 
 tae-r.2   123087719   ATP-dependent zinc metalloprotease FTSH 5, mitochondrial 
 hvu-r.1   123452713   ATP-dependent zinc metalloprotease FTSH 5, mitochondrial-like 
 hvu-r.1   123394987   ATP-dependent zinc metalloprotease FTSH 5, mitochondrial-like 
 hvu-r.1   123443895   ATP-dependent zinc metalloprotease FTSH 9, chloroplastic/mitochondrial 
 sbi-r.1   8078625   ATP-dependent zinc metalloprotease FTSH 5, mitochondrial 
 sbi-r.1   8084838   ATP-dependent zinc metalloprotease FTSH 9, chloroplastic/mitochondrial 
 bdi-r.1   100831547   ATP-dependent zinc metalloprotease FTSH 9, chloroplastic/mitochondrial 
 bdi-r.1   100842853   ATP-dependent zinc metalloprotease FTSH 5, mitochondrial 
 bdi-r.1   100839911   ATP-dependent zinc metalloprotease FTSH 5, mitochondrial 
 cre-r.1   CHLRE_14g625625v5   uncharacterized protein 
 cre-r.1   CHLRE_13g568400v5   uncharacterized protein 

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Top 50 coexpressed genes to 107937625 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107937625 (ghi-r.1 coexpression data)

CoexMap"107937625"


ghiLOC107937625 | Entrez gene ID : 107937625    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 2 3 2 3 3 3 3 3 3 3 2 3 2 3 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006508 [list] [network] proteolysis  (1903 genes)  IEA  
GO CC
GO:0009534 [list] [network] chloroplast thylakoid  (354 genes)  IEA  
GO:0016020 [list] [network] membrane  (8195 genes)  IEA  
GO MF
GO:0004176 [list] [network] ATP-dependent peptidase activity  (96 genes)  IEA  
GO:0004222 [list] [network] metalloendopeptidase activity  (137 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (974 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_016726033.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  cyto 1,  golg 1,  cyto_nucl 1  (predict for XP_016726033.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016726033.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107937625
ghi-r.1
for
107904258
ghi-r.1
for
107929944
ghi-r.1
for
107893400
ath-u.5
for
ftsh4
ath-u.5
for
FTSH11
bra-r.6
for
103842161
bra-r.6
for
103844798
bra-r.6
for
103852050
bna-r.1
for
125592956
bna-r.1
for
106368543
bna-r.1
for
106391749
cit-r.1
for
102621961
cit-r.1
for
102607606
gma-u.5
for
100815980
gma-u.5
for
100814187
gma-u.5
for
100808349
vvi-u.5
for
100252645
vvi-u.5
for
100250114
ppo-u.5
for
7470693
ppo-u.5
for
7485221
ppo-u.5
for
7475612
mtr-u.5
for
11421454
mtr-u.5
for
11433616
mtr-u.5
for
11434270
sly-u.5
for
101257288
sly-u.5
for
101252055
sly-u.5
for
543882
sot-r.1
for
102591239
sot-r.1
for
102582577
sot-r.1
for
102585612
nta-r.1
for
107830288
nta-r.1
for
107768422
nta-r.1
for
107804496
osa-u.5
for
4326617
osa-u.5
for
4326311
osa-u.5
for
4326310
zma-u.5
for
100382151
zma-u.5
for
103635431
zma-u.5
for
100384366
tae-r.2
for
123087720
tae-r.2
for
123087719
hvu-r.1
for
123452713
hvu-r.1
for
123394987
hvu-r.1
for
123443895
sbi-r.1
for
8078625
sbi-r.1
for
8084838
bdi-r.1
for
100831547
bdi-r.1
for
100842853
bdi-r.1
for
100839911
cre-r.1
for
CHLRE_14g625625v5
cre-r.1
for
CHLRE_13g568400v5


Ortholog ID: 1009
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit cit gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu sbi sbi bdi bdi bdi cre cre
Symbol LOC107904258 LOC107929944 LOC107890764 ftsh4 FTSH11 LOC103842161 LOC103852050 LOC103864716 LOC106368543 LOC106414951 LOC106430568 LOC102621961 LOC102607606 LOC100814187 LOC100784979 LOC100252645 LOC100250114 LOC7470693 LOC7485221 LOC7475612 LOC11421454 LOC11434270 LOC25502810 LOC101257288 LOC101252055 LOC543882 LOC102591239 LOC102582577 LOC102585612 LOC107830288 LOC107804496 LOC107796013 LOC4326617 LOC4326311 LOC4326310 LOC100384366 LOC103636076 LOC100502173 LOC123078430 LOC123069966 LOC123123713 LOC123443746 LOC8078625 LOC8084838 LOC100831547 LOC100842853 LOC100839911 CHLRE_14g625625v5 CHLRE_13g568400v5
Function* ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 4, mitochondrial ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial FTSH protease 4 FTSH protease 11 ATP-dependent zinc metalloprotease FTSH 4, mitochondrial ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 4, mitochondrial ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 4, mitochondrial ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial-like ATP-dependent zinc metalloprotease FTSH 4, mitochondrial ATP-dependent zinc metalloprotease FTSH 4, mitochondrial ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 4, mitochondrial ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 4, mitochondrial ATP-dependent zinc metalloprotease FTSH 4, mitochondrial ATP-dependent zinc metalloprotease FTSH 4, mitochondrial ATP-dependent zinc metalloprotease FTSH 4, mitochondrial ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial putative FtsH protease ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like ATP-dependent zinc metalloprotease FTSH 9, chloroplastic/mitochondrial-like ATP-dependent zinc metalloprotease FTSH 5, mitochondrial-like ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like ATP-dependent zinc metalloprotease FTSH 4 mitochondrial ATP-dependent zinc metalloprotease FTSH 9, chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 11 chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 5, mitochondrial ATP-dependent zinc metalloprotease FTSH 5, mitochondrial ATP-dependent zinc metalloprotease FTSH 4, mitochondrial ATP-dependent zinc metalloprotease FTSH 5, mitochondrial ATP-dependent zinc metalloprotease FTSH 5, mitochondrial ATP-dependent zinc metalloprotease FTSH 9, chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 9, chloroplastic/mitochondrial ATP-dependent zinc metalloprotease FTSH 5, mitochondrial ATP-dependent zinc metalloprotease FTSH 5, mitochondrial uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 4
ghi03018 RNA degradation 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00561 Glycerolipid metabolism 2
ghi00480 Glutathione metabolism 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00261 Monobactam biosynthesis 2
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 3
ath04141 Protein processing in endoplasmic reticulum 3
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00053 Ascorbate and aldarate metabolism 3
ath00480 Glutathione metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 2
bra00480 Glutathione metabolism 2
bra04120 Ubiquitin mediated proteolysis 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 2
bna00350 Tyrosine metabolism 2
bna00360 Phenylalanine metabolism 2
bna00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 3
cit03250 Viral life cycle - HIV-1 2
cit03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 2
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 4
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00860 Porphyrin metabolism 3
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
sot00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 4
osa04075 Plant hormone signal transduction 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00051 Fructose and mannose metabolism 2
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma00541 Biosynthesis of various nucleotide sugars 2
zma01240 Biosynthesis of cofactors 2
zma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu04120 Ubiquitin mediated proteolysis 2
hvu03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
sbi03050 Proteasome 2
sbi03018 RNA degradation 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 4
bdi01200 Carbon metabolism 3
bdi01240 Biosynthesis of cofactors 2
bdi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi00071 Fatty acid degradation 2
bdi01212 Fatty acid metabolism 2
bdi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 3
bdi04141 Protein processing in endoplasmic reticulum 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107904258 107929944 107890764 817154 835398 103842161 103852050 103864716 106368543 106414951 106430568 102621961 102607606 100814187 100784979 100252645 100250114 7470693 7485221 7475612 11421454 11434270 25502810 101257288 101252055 543882 102591239 102582577 102585612 107830288 107804496 107796013 4326617 4326311 4326310 100384366 103636076 100502173 123078430 123069966 123123713 123443746 8078625 8084838 100831547 100842853 100839911 5718294 5719092
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