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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107769277   U1 small nuclear ribonucleoprotein A-like 
 nta-r.1   107760078   U1 small nuclear ribonucleoprotein A 
 sly-u.5   101244611   U1 small nuclear ribonucleoprotein A 
 sot-r.1   102601989   U1 small nuclear ribonucleoprotein A-like 
 ath-u.5   U1A   spliceosomal protein U1A 
 gma-u.5   100777062   U1 small nuclear ribonucleoprotein A 
 gma-u.5   100500002   putative spliceosomal protein U1A 
 bra-r.6   103866362   U1 small nuclear ribonucleoprotein A 
 vvi-u.5   100243572   U1 small nuclear ribonucleoprotein A 
 ppo-u.5   18109788   U1 small nuclear ribonucleoprotein A 
 ppo-u.5   7495243   U1 small nuclear ribonucleoprotein A 
 mtr-u.5   25499590   U1 small nuclear ribonucleoprotein A 
 mtr-u.5   25493023   U1 small nuclear ribonucleoprotein A 
 ghi-r.1   107926893   U1 small nuclear ribonucleoprotein A 
 ghi-r.1   107913725   U1 small nuclear ribonucleoprotein A 
 ghi-r.1   107925675   U1 small nuclear ribonucleoprotein A 
 bna-r.1   106396058   U1 small nuclear ribonucleoprotein A 
 bna-r.1   106450442   U1 small nuclear ribonucleoprotein A-like 
 cit-r.1   102610491   U1 small nuclear ribonucleoprotein A 
 osa-u.5   4337846   U1 small nuclear ribonucleoprotein A-like 
 zma-u.5   100277950   uncharacterized LOC100277950 
 tae-r.2   123191664   U1 small nuclear ribonucleoprotein A 
 tae-r.2   123180562   U1 small nuclear ribonucleoprotein A 
 tae-r.2   123113625   U1 small nuclear ribonucleoprotein A 
 hvu-r.1   123425889   U1 small nuclear ribonucleoprotein A 
 sbi-r.1   8076009   U1 small nuclear ribonucleoprotein A 
 bdi-r.1   100841222   U1 small nuclear ribonucleoprotein A 

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Top 50 coexpressed genes to 107769277 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107769277 (nta-r.1 coexpression data)

CoexMap"107769277"


ntaLOC107769277 | Entrez gene ID : 107769277      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 1 1 2 1 1 2 2 3 2 1 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta03040 [list] [network] Spliceosome (402 genes)
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
Protein XP_016443970.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_016443970.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016443970.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107769277
nta-r.1
for
107760078
sly-u.5
for
101244611
sot-r.1
for
102601989
ath-u.5
for
U1A
gma-u.5
for
100777062
gma-u.5
for
100500002
bra-r.6
for
103866362
vvi-u.5
for
100243572
ppo-u.5
for
18109788
ppo-u.5
for
7495243
mtr-u.5
for
25499590
mtr-u.5
for
25493023
ghi-r.1
for
107926893
ghi-r.1
for
107913725
ghi-r.1
for
107925675
bna-r.1
for
106396058
bna-r.1
for
106450442
cit-r.1
for
102610491
osa-u.5
for
4337846
zma-u.5
for
100277950
tae-r.2
for
123191664
tae-r.2
for
123180562
tae-r.2
for
123113625
hvu-r.1
for
123425889
sbi-r.1
for
8076009
bdi-r.1
for
100841222


Ortholog ID: 8433
Species nta nta sly sot ath gma gma bra vvi ppo ppo mtr mtr ghi ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi
Symbol LOC107769277 LOC107760078 LOC101244611 LOC102601989 U1A LOC100777062 LOC100500002 LOC103866362 LOC100243572 LOC18109788 LOC7495243 LOC25499590 LOC25493023 LOC107926893 LOC107925675 LOC107946067 LOC106396058 LOC106450442 LOC102610491 LOC4337846 LOC100277950 LOC123191664 LOC123180562 LOC123113625 LOC123425889 LOC8076009 LOC100841222
Function* U1 small nuclear ribonucleoprotein A-like U1 small nuclear ribonucleoprotein A U1 small nuclear ribonucleoprotein A U1 small nuclear ribonucleoprotein A-like spliceosomal protein U1A U1 small nuclear ribonucleoprotein A putative spliceosomal protein U1A U1 small nuclear ribonucleoprotein A U1 small nuclear ribonucleoprotein A U1 small nuclear ribonucleoprotein A U1 small nuclear ribonucleoprotein A U1 small nuclear ribonucleoprotein A U1 small nuclear ribonucleoprotein A U1 small nuclear ribonucleoprotein A U1 small nuclear ribonucleoprotein A U1 small nuclear ribonucleoprotein A U1 small nuclear ribonucleoprotein A U1 small nuclear ribonucleoprotein A-like U1 small nuclear ribonucleoprotein A U1 small nuclear ribonucleoprotein A-like uncharacterized LOC100277950 U1 small nuclear ribonucleoprotein A U1 small nuclear ribonucleoprotein A U1 small nuclear ribonucleoprotein A U1 small nuclear ribonucleoprotein A U1 small nuclear ribonucleoprotein A U1 small nuclear ribonucleoprotein A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 17
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 19
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 5
ath03040 Spliceosome 3
ath03020 RNA polymerase 2
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 15
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03010 Ribosome 3
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 7
ppo03040 Spliceosome 5
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 3
bna03082 ATP-dependent chromatin remodeling 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit03040 Spliceosome 3
cit03013 Nucleocytoplasmic transport 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03013 Nucleocytoplasmic transport 2
osa03015 mRNA surveillance pathway 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03082 ATP-dependent chromatin remodeling 2
zma04120 Ubiquitin mediated proteolysis 2
zma03040 Spliceosome 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 6
tae03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 6
tae03040 Spliceosome 2
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03015 mRNA surveillance pathway 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi03015 mRNA surveillance pathway 4
bdi03013 Nucleocytoplasmic transport 3
bdi03050 Proteasome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107769277 107760078 101244611 102601989 819371 100777062 100500002 103866362 100243572 18109788 7495243 25499590 25493023 107926893 107925675 107946067 106396058 106450442 102610491 4337846 100277950 123191664 123180562 123113625 123425889 8076009 100841222
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