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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107770040   zinc finger CCCH domain-containing protein 25 
 sly-u.5   101251965   zinc finger CCCH domain-containing protein 25 
 ath-u.5   AT3G47120   RNA recognition motif (RRM)-containing protein 
 gma-u.5   100814734   zinc finger CCCH domain-containing protein 25 
 gma-u.5   100792988   RNA recognition motif and zinc finger domain-containing protein 
 vvi-u.5   100246760   zinc finger CCCH domain-containing protein 25 
 ppo-u.5   7468567   zinc finger CCCH domain-containing protein 25 
 mtr-u.5   11406304   zinc finger CCCH domain-containing protein 25 
 osa-u.5   4334639   zinc finger CCCH domain-containing protein 25-like 
 zma-u.5   100282627   uncharacterized LOC100282627 

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Top 50 coexpressed genes to 107770040 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107770040 (nta-r.1 coexpression data)

CoexMap"107770040"


ntaLOC107770040 | Entrez gene ID : 107770040      
Species nta sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi tae cre sot
Paralog 1 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta03040 [list] [network] Spliceosome (402 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (282 genes)  IEA  
GO CC
GO:0005686 [list] [network] U2 snRNP  (19 genes)  IEA  
GO:0071011 [list] [network] precatalytic spliceosome  (42 genes)  IEA  
GO:0071013 [list] [network] catalytic step 2 spliceosome  (81 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (4462 genes)  IEA  
Protein XP_016444785.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_016444785.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016444785.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107770040
sly-u.5
for
101251965
ath-u.5
for
AT3G47120
gma-u.5
for
100814734
gma-u.5
for
100792988
vvi-u.5
for
100246760
ppo-u.5
for
7468567
mtr-u.5
for
11406304
osa-u.5
for
4334639
zma-u.5
for
100282627


Ortholog ID: 8040
Species nta nta sly sot ath gma gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi cre
Symbol LOC107805859 LOC107770040 LOC101251965 LOC102592972 AT3G47120 LOC100814734 LOC100792988 LOC103873259 LOC100246760 LOC7468567 LOC11406304 LOC107906614 LOC107959184 LOC106371356 LOC106352726 LOC102615951 LOC4334639 LOC100282627 LOC123187752 LOC123051873 LOC123453129 LOC8079701 LOC100832621 CHLRE_06g280550v5
Function* zinc finger CCCH domain-containing protein 25 zinc finger CCCH domain-containing protein 25 zinc finger CCCH domain-containing protein 25 zinc finger CCCH domain-containing protein 25 RNA recognition motif (RRM)-containing protein zinc finger CCCH domain-containing protein 25 RNA recognition motif and zinc finger domain-containing protein zinc finger CCCH domain-containing protein 42 zinc finger CCCH domain-containing protein 25 zinc finger CCCH domain-containing protein 25 zinc finger CCCH domain-containing protein 25 zinc finger CCCH domain-containing protein 25 zinc finger CCCH domain-containing protein 25 zinc finger CCCH domain-containing protein 42 zinc finger CCCH domain-containing protein 42-like zinc finger CCCH domain-containing protein 42 zinc finger CCCH domain-containing protein 25-like uncharacterized LOC100282627 zinc finger CCCH domain-containing protein 25 zinc finger CCCH domain-containing protein 25 zinc finger CCCH domain-containing protein 25 zinc finger CCCH domain-containing protein 25 zinc finger CCCH domain-containing protein 25 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 4
zma03040 Spliceosome 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 5
cre04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107805859 107770040 101251965 102592972 823865 100814734 100792988 103873259 100246760 7468567 11406304 107906614 107959184 106371356 106352726 102615951 4334639 100282627 123187752 123051873 123453129 8079701 100832621 5720912
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