ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	107775219	small ribosomal subunit protein eS24z
nta-r.1	107798733	small ribosomal subunit protein eS24z
nta-r.1	107801095	small ribosomal subunit protein eS24z
nta-r.1	107776707	small ribosomal subunit protein eS24z
sly-u.5	101244617	small ribosomal subunit protein eS24z
sly-u.5	101253000	small ribosomal subunit protein eS24z
sly-u.5	101258992	small ribosomal subunit protein eS24z
sot-r.1	102595901	40S ribosomal protein S24-1
sot-r.1	102600146	40S ribosomal protein S24-1
sot-r.1	102590529	40S ribosomal protein S24-1
ath-u.5	AT3G04920	Ribosomal protein S24e family protein
ath-u.5	AT5G28060	Ribosomal protein S24e family protein
gma-u.5	100499852	uncharacterized LOC100499852
gma-u.5	100499673	uncharacterized LOC100499673
gma-u.5	100305568	uncharacterized LOC100305568
bra-r.6	103837315	40S ribosomal protein S24-1
bra-r.6	103850022	40S ribosomal protein S24-1
bra-r.6	103854641	40S ribosomal protein S24-1
vvi-u.5	100853567	small ribosomal subunit protein eS24z
vvi-u.5	100243420	40S ribosomal protein S24-2-like
ppo-u.5	7467486	40S ribosomal protein S24-1
ppo-u.5	7498080	40S ribosomal protein S24-1
ppo-u.5	18098933	40S ribosomal protein S24-1
mtr-u.5	11431323	40S ribosomal protein S24-1
mtr-u.5	11405915	40S ribosomal protein S24-1
ghi-r.1	107893222	40S ribosomal protein S24-1
ghi-r.1	107894739	40S ribosomal protein S24-1
ghi-r.1	107899149	40S ribosomal protein S24-1
bna-r.1	125607165	40S ribosomal protein S24-1-like
bna-r.1	111211530	40S ribosomal protein S24-1
bna-r.1	111208501	40S ribosomal protein S24-1-like
cit-r.1	102608879	40S ribosomal protein S24-1
cit-r.1	102609400	40S ribosomal protein S24-1
cit-r.1	102627216	40S ribosomal protein S24-1
osa-u.5	4324671	small ribosomal subunit protein eS24z
osa-u.5	4328797	small ribosomal subunit protein eS24z
osa-u.5	4341282	small ribosomal subunit protein eS24z
zma-u.5	100280577	ribosomal protein S24
zma-u.5	542641	40S ribosomal protein S24
zma-u.5	103629822	40S ribosomal protein S24-1-like
tae-r.2	123156961	40S ribosomal protein S24-1
tae-r.2	123062030	40S ribosomal protein S24-1
tae-r.2	123137260	40S ribosomal protein S24-1
hvu-r.1	123407800	40S ribosomal protein S24-1
hvu-r.1	123450305	40S ribosomal protein S24-1-like
sbi-r.1	8076707	40S ribosomal protein S24-1
sbi-r.1	8085549	40S ribosomal protein S24-1
sbi-r.1	8069811	40S ribosomal protein S24-1
bdi-r.1	100846487	40S ribosomal protein S24-1
bdi-r.1	100833592	40S ribosomal protein S24-1
cre-r.1	CHLRE_10g456200v5	ribosomal protein S24

Top 50 coexpressed genes to 107775219 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107775219 (nta-r.1 coexpression data)

CoexMap"107775219"

[Cytoscape]

Annotation

functional annotation

KEGG

nta03010 [list] [network] Ribosome (765 genes)

GO BP

GO:0006412 [list] [network] translation

(1013 genes)

IEA

GO CC

GO:0005840 [list] [network] ribosome

(734 genes)

IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome

(725 genes)

IEA

Protein

XP_016450415.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 4, mito 1

(predict for XP_016450415.1)

Subcellular
localization
TargetP

mito 5

(predict for XP_016450415.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107775219	nta-r.1 for 107798733	nta-r.1 for 107801095	nta-r.1 for 107776707	sly-u.5 for 101244617	sly-u.5 for 101253000	sly-u.5 for 101258992	sot-r.1 for 102595901	sot-r.1 for 102600146	sot-r.1 for 102590529	ath-u.5 for AT3G04920	ath-u.5 for AT5G28060	gma-u.5 for 100499852	gma-u.5 for 100499673	gma-u.5 for 100305568	bra-r.6 for 103837315	bra-r.6 for 103850022	bra-r.6 for 103854641	vvi-u.5 for 100853567	vvi-u.5 for 100243420	ppo-u.5 for 7467486	ppo-u.5 for 7498080	ppo-u.5 for 18098933	mtr-u.5 for 11431323	mtr-u.5 for 11405915	ghi-r.1 for 107893222	ghi-r.1 for 107894739	ghi-r.1 for 107899149	bna-r.1 for 125607165	bna-r.1 for 111211530	bna-r.1 for 111208501	cit-r.1 for 102608879	cit-r.1 for 102609400	cit-r.1 for 102627216	osa-u.5 for 4324671	osa-u.5 for 4328797	osa-u.5 for 4341282	zma-u.5 for 100280577	zma-u.5 for 542641	zma-u.5 for 103629822	tae-r.2 for 123156961	tae-r.2 for 123062030	tae-r.2 for 123137260	hvu-r.1 for 123407800	hvu-r.1 for 123450305	sbi-r.1 for 8076707	sbi-r.1 for 8085549	sbi-r.1 for 8069811	bdi-r.1 for 100846487	bdi-r.1 for 100833592	cre-r.1 for CHLRE_10g456200v5

Ortholog

Ortholog ID: 1421

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

small ribosomal subunit protein eS24z

40S ribosomal protein S24-1

Ribosomal protein S24e family protein

uncharacterized LOC100499852

uncharacterized LOC100305568

40S ribosomal protein S24-2-like

40S ribosomal protein S24-1

small ribosomal subunit protein eS24z

40S ribosomal protein S24-2-like

40S ribosomal protein S24-1

40S ribosomal protein S24-1-like

40S ribosomal protein S24-1

small ribosomal subunit protein eS24z

ribosomal protein S24

40S ribosomal protein S24

40S ribosomal protein S24-1

40S ribosomal protein S24-1-like

40S ribosomal protein S24-1

ribosomal protein S24

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	15
nta03040	Spliceosome	4
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	14
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	12
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	13
sot00220	Arginine biosynthesis	2
sot00240	Pyrimidine metabolism	2
sot00250	Alanine, aspartate and glutamate metabolism	2
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	18
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03018	RNA degradation	2
cit03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	15
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00710	Carbon fixation by Calvin cycle	4
tae01200	Carbon metabolism	4
tae00220	Arginine biosynthesis	3
tae00250	Alanine, aspartate and glutamate metabolism	3
tae00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	13

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	17

Expression

Expression pattern

Entrez Gene ID^*

107801095

107768485

107791538

101244617

101253000

101258992

102595901

102600146

102590529

819652

832878

100499852

100305568

100802918

103850022

103854641

103874568

100853567

100243420

7467486

7498080

18110984

11431323

11405915

107899149

107934276

121206341

111211530

125602054

106449179

102608879

102609400

102627216

4324671

4328797

4341282

100280577

542641

100284180

123062030

123147979

123165192

123402042

8076707

8085549

8069811

100846487

100833592

5723924

The preparation time of this page was 0.2 [sec].


Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	2	3	3	2	3	2	3	3	3	3	3	3	2	3	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107775219 (nta-r.1 coexpression data)

Top 50 enrichment test to 107775219 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**