Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G28060   Ribosomal protein S24e family protein 
 ath-r.7   AT5G28060   Ribosomal protein S24e family protein 
 ath-m.9   AT5G28060   Ribosomal protein S24e family protein 
 ath-e.2   AT5G28060   Ribosomal protein S24e family protein 
 ath-m.4.bio   AT5G28060   Ribosomal protein S24e family protein 
 ath-m.4.hor   AT5G28060   Ribosomal protein S24e family protein 
 ath-m.4.lig   AT5G28060   Ribosomal protein S24e family protein 
 ath-m.4.str   AT5G28060   Ribosomal protein S24e family protein 
 ath-m.4.tis   AT5G28060   Ribosomal protein S24e family protein 
 ath-u.5   AT3G04920   Ribosomal protein S24e family protein 
 bra-r.6   103854641   40S ribosomal protein S24-1 
 bra-r.6   103850022   40S ribosomal protein S24-1 
 bra-r.6   103874568   40S ribosomal protein S24-1 
 bna-r.1   125607165   40S ribosomal protein S24-1-like 
 bna-r.1   125602054   40S ribosomal protein S24-1-like 
 bna-r.1   125577698   40S ribosomal protein S24-1 
 ghi-r.1   107893222   40S ribosomal protein S24-1 
 ghi-r.1   107894739   40S ribosomal protein S24-1 
 ghi-r.1   107899149   40S ribosomal protein S24-1 
 cit-r.1   102608879   40S ribosomal protein S24-1 
 cit-r.1   102609400   40S ribosomal protein S24-1 
 cit-r.1   102627216   40S ribosomal protein S24-1 
 gma-u.5   100305568   uncharacterized LOC100305568 
 gma-u.5   100499673   uncharacterized LOC100499673 
 gma-u.5   100499852   uncharacterized LOC100499852 
 vvi-u.5   100243420   40S ribosomal protein S24-2-like 
 vvi-u.5   100853567   small ribosomal subunit protein eS24z 
 ppo-u.5   7467486   40S ribosomal protein S24-1 
 ppo-u.5   18110984   40S ribosomal protein S24-1 
 ppo-u.5   18098933   40S ribosomal protein S24-1 
 mtr-u.5   11405915   40S ribosomal protein S24-1 
 mtr-u.5   11431323   40S ribosomal protein S24-1 
 sly-u.5   101244617   small ribosomal subunit protein eS24z 
 sly-u.5   101253000   small ribosomal subunit protein eS24z 
 sly-u.5   101258992   small ribosomal subunit protein eS24z 
 sot-r.1   102600146   40S ribosomal protein S24-1 
 sot-r.1   102590529   40S ribosomal protein S24-1 
 sot-r.1   102595901   40S ribosomal protein S24-1 
 nta-r.1   107791538   small ribosomal subunit protein eS24z 
 nta-r.1   107798733   small ribosomal subunit protein eS24z 
 nta-r.1   107768485   small ribosomal subunit protein eS24z 
 osa-u.5   4341282   small ribosomal subunit protein eS24z 
 osa-u.5   4328797   small ribosomal subunit protein eS24z 
 osa-u.5   4324671   small ribosomal subunit protein eS24z 
 zma-u.5   100284180   40S ribosomal protein S24 
 zma-u.5   100280577   ribosomal protein S24 
 zma-u.5   103629822   40S ribosomal protein S24-1-like 
 tae-r.2   123165192   40S ribosomal protein S24-1 
 tae-r.2   123062030   40S ribosomal protein S24-1 
 tae-r.2   123137260   40S ribosomal protein S24-1 
 hvu-r.1   123450305   40S ribosomal protein S24-1-like 
 hvu-r.1   123407800   40S ribosomal protein S24-1 
 sbi-r.1   8069811   40S ribosomal protein S24-1 
 sbi-r.1   8085549   40S ribosomal protein S24-1 
 sbi-r.1   8076707   40S ribosomal protein S24-1 
 bdi-r.1   100846487   40S ribosomal protein S24-1 
 bdi-r.1   100833592   40S ribosomal protein S24-1 
 cre-r.1   CHLRE_10g456200v5   ribosomal protein S24 

close


Top 50 coexpressed genes to AT5G28060 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT5G28060 (ath-u.5 coexpression data)

CoexMap"832878"


athAT5G28060 | Entrez gene ID : 832878      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 3 3 3 2 3 2 3 3 3 3 3 3 2 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO:0006412 [list] [network] translation  (926 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (93 genes)  HDA  
GO:0022626 [list] [network] cytosolic ribosome  (295 genes)  HDA  
GO:0009505 [list] [network] plant-type cell wall  (504 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  RCA  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_198158.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 3,  cyto 3  (predict for NP_198158.1)
Subcellular
localization
TargetP
mito 5  (predict for NP_198158.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G28060
ath-r.7
for
AT5G28060
ath-m.9
for
AT5G28060
ath-e.2
for
AT5G28060
ath-m.4.bio
for
AT5G28060
ath-m.4.hor
for
AT5G28060
ath-m.4.lig
for
AT5G28060
ath-m.4.str
for
AT5G28060
ath-m.4.tis
for
AT5G28060
ath-u.5
for
AT3G04920
bra-r.6
for
103854641
bra-r.6
for
103850022
bra-r.6
for
103874568
bna-r.1
for
125607165
bna-r.1
for
125602054
bna-r.1
for
125577698
ghi-r.1
for
107893222
ghi-r.1
for
107894739
ghi-r.1
for
107899149
cit-r.1
for
102608879
cit-r.1
for
102609400
cit-r.1
for
102627216
gma-u.5
for
100305568
gma-u.5
for
100499673
gma-u.5
for
100499852
vvi-u.5
for
100243420
vvi-u.5
for
100853567
ppo-u.5
for
7467486
ppo-u.5
for
18110984
ppo-u.5
for
18098933
mtr-u.5
for
11405915
mtr-u.5
for
11431323
sly-u.5
for
101244617
sly-u.5
for
101253000
sly-u.5
for
101258992
sot-r.1
for
102600146
sot-r.1
for
102590529
sot-r.1
for
102595901
nta-r.1
for
107791538
nta-r.1
for
107798733
nta-r.1
for
107768485
osa-u.5
for
4341282
osa-u.5
for
4328797
osa-u.5
for
4324671
zma-u.5
for
100284180
zma-u.5
for
100280577
zma-u.5
for
103629822
tae-r.2
for
123165192
tae-r.2
for
123062030
tae-r.2
for
123137260
hvu-r.1
for
123450305
hvu-r.1
for
123407800
sbi-r.1
for
8069811
sbi-r.1
for
8085549
sbi-r.1
for
8076707
bdi-r.1
for
100846487
bdi-r.1
for
100833592
cre-r.1
for
CHLRE_10g456200v5


Ortholog ID: 1421
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu sbi sbi sbi bdi bdi cre
Symbol AT5G28060 AT3G04920 LOC103854641 LOC103850022 LOC103874568 LOC125602054 LOC111211530 LOC106449179 LOC107899149 LOC107934276 LOC121206341 LOC102608879 LOC102609400 LOC102627216 LOC100305568 LOC100499852 LOC100802918 LOC100243420 LOC100853567 LOC7467486 LOC18110984 LOC7498080 LOC11405915 LOC11431323 LOC101244617 LOC101253000 LOC101258992 LOC102600146 LOC102590529 LOC102595901 LOC107791538 LOC107768485 LOC107801095 LOC4341282 LOC4328797 LOC4324671 LOC100284180 LOC100280577 LOC542641 LOC123165192 LOC123062030 LOC123147979 LOC123402042 LOC8069811 LOC8085549 LOC8076707 LOC100846487 LOC100833592 CHLRE_10g456200v5
Function* Ribosomal protein S24e family protein Ribosomal protein S24e family protein 40S ribosomal protein S24-1 40S ribosomal protein S24-1 40S ribosomal protein S24-1 40S ribosomal protein S24-1-like 40S ribosomal protein S24-1 40S ribosomal protein S24-1 40S ribosomal protein S24-1 40S ribosomal protein S24-1 40S ribosomal protein S24-1 40S ribosomal protein S24-1 40S ribosomal protein S24-1 40S ribosomal protein S24-1 uncharacterized LOC100305568 uncharacterized LOC100499852 40S ribosomal protein S24-2-like 40S ribosomal protein S24-2-like small ribosomal subunit protein eS24z 40S ribosomal protein S24-1 40S ribosomal protein S24-1 40S ribosomal protein S24-1 40S ribosomal protein S24-1 40S ribosomal protein S24-1 small ribosomal subunit protein eS24z small ribosomal subunit protein eS24z small ribosomal subunit protein eS24z 40S ribosomal protein S24-1 40S ribosomal protein S24-1 40S ribosomal protein S24-1 small ribosomal subunit protein eS24z small ribosomal subunit protein eS24z small ribosomal subunit protein eS24z small ribosomal subunit protein eS24z small ribosomal subunit protein eS24z small ribosomal subunit protein eS24z 40S ribosomal protein S24 ribosomal protein S24 40S ribosomal protein S24 40S ribosomal protein S24-1 40S ribosomal protein S24-1 40S ribosomal protein S24-1 40S ribosomal protein S24-1-like 40S ribosomal protein S24-1 40S ribosomal protein S24-1 40S ribosomal protein S24-1 40S ribosomal protein S24-1 40S ribosomal protein S24-1 ribosomal protein S24
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
sot00220 Arginine biosynthesis 2
sot00240 Pyrimidine metabolism 2
sot00250 Alanine, aspartate and glutamate metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 12
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 15
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 4
tae01200 Carbon metabolism 4
tae00220 Arginine biosynthesis 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 17
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832878 819652 103854641 103850022 103874568 125602054 111211530 106449179 107899149 107934276 121206341 102608879 102609400 102627216 100305568 100499852 100802918 100243420 100853567 7467486 18110984 7498080 11405915 11431323 101244617 101253000 101258992 102600146 102590529 102595901 107791538 107768485 107801095 4341282 4328797 4324671 100284180 100280577 542641 123165192 123062030 123147979 123402042 8069811 8085549 8076707 100846487 100833592 5723924
The preparation time of this page was 0.3 [sec].