ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	107777714	uncharacterized LOC107777714
nta-r.1	107805950	uncharacterized LOC107805950
nta-r.1	107771040	uncharacterized LOC107771040
sly-u.5	101249730	uncharacterized LOC101249730
sot-r.1	102593120	ER membrane protein complex subunit 3
ath-u.5	AT4G12590	ER membrane protein complex subunit-like protein (Protein of unknown function DUF106, transmembrane)
gma-u.5	100788772	ER membrane protein complex subunit 3-like
gma-u.5	100816887	ER membrane protein complex subunit 3
bra-r.6	103839876	ER membrane protein complex subunit 3
bra-r.6	103860037	ER membrane protein complex subunit 3
bra-r.6	103834247	ER membrane protein complex subunit 3
vvi-u.5	100853397	uncharacterized LOC100853397
ppo-u.5	7453703	uncharacterized LOC7453703
ppo-u.5	7458501	uncharacterized LOC7458501
mtr-u.5	11420828	ER membrane protein complex subunit 3
ghi-r.1	107930393	ER membrane protein complex subunit 3
ghi-r.1	107930392	ER membrane protein complex subunit 3
ghi-r.1	107925214	ER membrane protein complex subunit 3
bna-r.1	106437620	ER membrane protein complex subunit 3
bna-r.1	106383092	ER membrane protein complex subunit 3
bna-r.1	106360977	ER membrane protein complex subunit 3
cit-r.1	102626840	uncharacterized LOC102626840
osa-u.5	4347461	uncharacterized LOC4347461
zma-u.5	100283278	uncharacterized LOC100283278
tae-r.2	123121998	ER membrane protein complex subunit 3
tae-r.2	123112489	ER membrane protein complex subunit 3
tae-r.2	123104232	ER membrane protein complex subunit 3
hvu-r.1	123399583	ER membrane protein complex subunit 3
sbi-r.1	110432525	ER membrane protein complex subunit 3
bdi-r.1	100833630	ER membrane protein complex subunit 3
cre-r.1	CHLRE_09g400400v5	uncharacterized protein

Top 50 coexpressed genes to 107777714 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107777714 (nta-r.1 coexpression data)

CoexMap"107777714"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0034975 [list] [network] protein folding in endoplasmic reticulum

(17 genes)

IEA

GO CC

GO:0072546 [list] [network] EMC complex	(19 genes)	IEA
GO:0016020 [list] [network] membrane	(5892 genes)	IEA

GO MF

Protein

XP_016453327.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 2, chlo 1, nucl 1, mito 1, chlo_mito 1, E.R._plas 1, plas 1, E.R. 1, cyto_nucl 1

(predict for XP_016453327.1)

Subcellular
localization
TargetP

scret 7, other 4

(predict for XP_016453327.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107777714	nta-r.1 for 107805950	nta-r.1 for 107771040	sly-u.5 for 101249730	sot-r.1 for 102593120	ath-u.5 for AT4G12590	gma-u.5 for 100788772	gma-u.5 for 100816887	bra-r.6 for 103839876	bra-r.6 for 103860037	bra-r.6 for 103834247	vvi-u.5 for 100853397	ppo-u.5 for 7453703	ppo-u.5 for 7458501	mtr-u.5 for 11420828	ghi-r.1 for 107930393	ghi-r.1 for 107930392	ghi-r.1 for 107925214	bna-r.1 for 106437620	bna-r.1 for 106383092	bna-r.1 for 106360977	cit-r.1 for 102626840	osa-u.5 for 4347461	zma-u.5 for 100283278	tae-r.2 for 123121998	tae-r.2 for 123112489	tae-r.2 for 123104232	hvu-r.1 for 123399583	sbi-r.1 for 110432525	bdi-r.1 for 100833630	cre-r.1 for CHLRE_09g400400v5

Ortholog

Ortholog ID: 5790

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC107777714

uncharacterized LOC107805950

uncharacterized LOC107771040

uncharacterized LOC101249730

ER membrane protein complex subunit 3

ER membrane protein complex subunit-like protein (Protein of unknown function DUF106, transmembrane)

ER membrane protein complex subunit 3-like

ER membrane protein complex subunit 3

uncharacterized LOC100853397

uncharacterized LOC7453703

uncharacterized LOC7458501

ER membrane protein complex subunit 3

uncharacterized LOC102626840

uncharacterized LOC4347461

uncharacterized LOC100283278

ER membrane protein complex subunit 3

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03060	Protein export	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00510	N-Glycan biosynthesis	2
nta00513	Various types of N-glycan biosynthesis	2
nta04141	Protein processing in endoplasmic reticulum	2
nta03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03050	Proteasome	6
sly04016	MAPK signaling pathway - plant	2
sly04070	Phosphatidylinositol signaling system	2
sly04075	Plant hormone signal transduction	2
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	5
sot03013	Nucleocytoplasmic transport	4
sot03015	mRNA surveillance pathway	4
sot03020	RNA polymerase	2
sot03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03060	Protein export	2
ath00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	5
gma00190	Oxidative phosphorylation	2
gma03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	7
gma03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	2
bra04814	Motor proteins	2
bra04820	Cytoskeleton in muscle cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03015	mRNA surveillance pathway	4
bra04382	Cornified envelope formation	4
bra04136	Autophagy - other	2
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	2
ppo04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	7
ppo04145	Phagosome	6
ppo04144	Endocytosis	2
ppo03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03060	Protein export	4
mtr00100	Steroid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00900	Terpenoid backbone biosynthesis	3
ghi03013	Nucleocytoplasmic transport	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00900	Terpenoid backbone biosynthesis	2
ghi03013	Nucleocytoplasmic transport	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00900	Terpenoid backbone biosynthesis	3
ghi03013	Nucleocytoplasmic transport	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03272	Virion - Hepatitis viruses	4
bna04144	Endocytosis	4
bna03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	3
cit04145	Phagosome	3
cit00190	Oxidative phosphorylation	3
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	4
zma03050	Proteasome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00100	Steroid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04142	Lysosome	2
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03050	Proteasome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	5
bdi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	7
cre03018	RNA degradation	2

Expression

Expression pattern

Entrez Gene ID^*

107777714

107805950

107771040

101249730

102593120

826872

100788772

100816887

103839876

103860037

103834247

100853397

7453703

7458501

11420828

107930393

107930392

107925213

106360977

106376527

106381582

102626840

4347461

100283278

123121998

123112489

123104232

123399583

110432525

100833630

5720693

The preparation time of this page was 0.1 [sec].


Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	1	1	1	2	3	1	2	1	3	3	1	1	1	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107777714 (nta-r.1 coexpression data)

Top 50 enrichment test to 107777714 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**