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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_09g400400v5   uncharacterized protein 
 ath-u.5   AT4G12590   ER membrane protein complex subunit-like protein (Protein of unknown function DUF106, transmembrane) 
 gma-u.5   100816887   ER membrane protein complex subunit 3 
 gma-u.5   100788772   ER membrane protein complex subunit 3-like 
 sly-u.5   101249730   uncharacterized LOC101249730 
 osa-u.5   4347461   uncharacterized LOC4347461 
 zma-u.5   100283278   uncharacterized LOC100283278 
 vvi-u.5   100853397   uncharacterized LOC100853397 
 ppo-u.5   7453703   uncharacterized LOC7453703 
 ppo-u.5   7458501   uncharacterized LOC7458501 
 mtr-u.5   11420828   ER membrane protein complex subunit 3 

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Top 50 coexpressed genes to CHLRE_09g400400v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_09g400400v5 (cre-r.1 coexpression data)

CoexMap"5720693"


creCHLRE_09g400400v5 | Entrez gene ID : 5720693      
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034975 [list] [network] protein folding in endoplasmic reticulum  (7 genes)  IEA  
GO CC
GO:0072546 [list] [network] EMC complex  (7 genes)  IEA  
GO:0016020 [list] [network] membrane  (1543 genes)  IEA  
GO MF
Protein XP_042920810.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  plas 1,  E.R._plas 1,  E.R. 1,  cyto 1,  mito 1,  extr 1  (predict for XP_042920810.1)
Subcellular
localization
TargetP
scret 6  (predict for XP_042920810.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_09g400400v5

.
ath-u.5
for
AT4G12590

.
gma-u.5
for
100816887

.
gma-u.5
for
100788772

.
sly-u.5
for
101249730

.
osa-u.5
for
4347461

.
zma-u.5
for
100283278

.
vvi-u.5
for
100853397

.
ppo-u.5
for
7453703

.
ppo-u.5
for
7458501

.
mtr-u.5
for
11420828

.


Ortholog ID: 5790
Species ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT4G12590 LOC100788772 LOC100816887 LOC101249730 LOC4347461 LOC100283278 LOC103860037 LOC103839876 LOC100853397 LOC7453703 LOC7458501 LOC11420828 LOC123112489 LOC123121998 LOC123399583 LOC107930392 LOC107930393 LOC106381582 LOC106376527 CHLRE_09g400400v5 LOC110432525 LOC102593120 LOC102626840 LOC100833630 LOC107771040 LOC107777714
Function* ER membrane protein complex subunit-like protein (Protein of unknown function DUF106, transmembrane) ER membrane protein complex subunit 3-like ER membrane protein complex subunit 3 uncharacterized LOC101249730 uncharacterized LOC4347461 uncharacterized LOC100283278 ER membrane protein complex subunit 3 ER membrane protein complex subunit 3 uncharacterized LOC100853397 uncharacterized LOC7453703 uncharacterized LOC7458501 ER membrane protein complex subunit 3 ER membrane protein complex subunit 3 ER membrane protein complex subunit 3 ER membrane protein complex subunit 3 ER membrane protein complex subunit 3 ER membrane protein complex subunit 3 ER membrane protein complex subunit 3 ER membrane protein complex subunit 3 uncharacterized protein ER membrane protein complex subunit 3 ER membrane protein complex subunit 3 uncharacterized LOC102626840 ER membrane protein complex subunit 3 uncharacterized LOC107771040 uncharacterized LOC107777714
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 2
ath00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma00190 Oxidative phosphorylation 2
gma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 6
sly04016 MAPK signaling pathway - plant 2
sly04070 Phosphatidylinositol signaling system 2
sly04075 Plant hormone signal transduction 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 4
zma03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
bra04814 Motor proteins 2
bra04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 2
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 7
ppo04145 Phagosome 6
ppo04144 Endocytosis 2
ppo03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03060 Protein export 4
mtr00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04142 Lysosome 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 2
ghi03013 Nucleocytoplasmic transport 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 3
ghi03013 Nucleocytoplasmic transport 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 7
cre03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03013 Nucleocytoplasmic transport 4
sot03015 mRNA surveillance pathway 4
sot03020 RNA polymerase 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit04145 Phagosome 3
cit00190 Oxidative phosphorylation 3
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 5
bdi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
nta03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826872 100788772 100816887 101249730 4347461 100283278 103860037 103839876 100853397 7453703 7458501 11420828 123112489 123121998 123399583 107930392 107930393 106381582 106376527 5720693 110432525 102593120 102626840 100833630 107771040 107777714
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