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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101260329   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 ath-u.5   AT1G80550   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   102664467   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 gma-u.5   100807218   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 vvi-u.5   100241994   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 vvi-u.5   100253966   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 ppo-u.5   7476425   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 mtr-u.5   11433587   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 osa-u.5   4337182   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 zma-u.5   100274078   uncharacterized LOC100274078 

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Top 50 coexpressed genes to 101260329 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101260329 (sly-u.5 coexpression data)

CoexMap"107779795"


ntaLOC107779795 | Entrez gene ID : 107779795    
Species sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_075107818.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 2,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_075107818.1)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for XP_075107818.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101260329
ath-u.5
for
AT1G80550
gma-u.5
for
102664467
gma-u.5
for
100807218
vvi-u.5
for
100241994
vvi-u.5
for
100253966
ppo-u.5
for
7476425
mtr-u.5
for
11433587
osa-u.5
for
4337182
zma-u.5
for
100274078


Ortholog ID: 10564
Species nta sly sot ath gma gma bra vvi vvi ppo mtr ghi ghi bna bna cit osa zma hvu sbi bdi
Symbol LOC142161603 LOC101260329 LOC102601356 AT1G80550 LOC102664467 LOC100807218 LOC103832474 LOC100253966 LOC100241994 LOC7476425 LOC11433587 LOC107914150 LOC107897281 LOC106354841 LOC106430695 LOC102627298 LOC4337182 LOC100274078 LOC123428181 LOC8068469 LOC100825476
Function* pentatricopeptide repeat-containing protein At1g80550, mitochondrial-like pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial-like pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial uncharacterized LOC100274078 pentatricopeptide repeat-containing protein At1g80550, mitochondrial-like pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 2
hvu01230 Biosynthesis of amino acids 2
hvu04146 Peroxisome 2
hvu03010 Ribosome 2
hvu00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 142161603 101260329 102601356 844394 102664467 100807218 103832474 100253966 100241994 7476425 11433587 107914150 107897281 106354841 106430695 102627298 4337182 100274078 123428181 8068469 100825476
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