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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7476425   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 ppo-r.4   7476425   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 ppo-m.4   7476425   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 gma-u.5   102664467   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 gma-u.5   100807218   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 mtr-u.5   11433587   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 ath-u.5   AT1G80550   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100241994   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 vvi-u.5   100253966   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 sly-u.5   101260329   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 osa-u.5   4337182   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 zma-u.5   100274078   uncharacterized LOC100274078 

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Top 50 coexpressed genes to 7476425 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7476425 (ppo-u.5 coexpression data)

CoexMap"7476425"


ppoLOC7476425 | Entrez gene ID : 7476425    
Species ppo gma mtr ath vvi sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 3 2 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002306508.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo_mito 5,  cyto_mito 4,  chlo 3  (predict for XP_002306508.1)
Subcellular
localization
TargetP
mito 7,  chlo 3  (predict for XP_002306508.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7476425
ppo-r.4
for
7476425
ppo-m.4
for
7476425
gma-u.5
for
102664467
gma-u.5
for
100807218
mtr-u.5
for
11433587
ath-u.5
for
AT1G80550
vvi-u.5
for
100241994
vvi-u.5
for
100253966
sly-u.5
for
101260329
osa-u.5
for
4337182
zma-u.5
for
100274078


Ortholog ID: 10564
Species ppo gma gma mtr ath bra vvi vvi ghi ghi bna bna cit sly sot nta osa zma hvu sbi bdi
Symbol LOC7476425 LOC102664467 LOC100807218 LOC11433587 AT1G80550 LOC103832474 LOC100253966 LOC100241994 LOC107914150 LOC107897281 LOC106354841 LOC106430695 LOC102627298 LOC101260329 LOC102601356 LOC142161603 LOC4337182 LOC100274078 LOC123428181 LOC8068469 LOC100825476
Function* pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial-like pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial-like pentatricopeptide repeat-containing protein At1g80550, mitochondrial uncharacterized LOC100274078 pentatricopeptide repeat-containing protein At1g80550, mitochondrial-like pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 2
hvu01230 Biosynthesis of amino acids 2
hvu04146 Peroxisome 2
hvu03010 Ribosome 2
hvu00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7476425 102664467 100807218 11433587 844394 103832474 100253966 100241994 107914150 107897281 106354841 106430695 102627298 101260329 102601356 142161603 4337182 100274078 123428181 8068469 100825476
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