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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107914150   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 ghi-r.1   107897281   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 ath-u.5   AT1G80550   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103832474   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 bna-r.1   106354841   pentatricopeptide repeat-containing protein At1g80550, mitochondrial-like 
 bna-r.1   106430695   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 cit-r.1   102627298   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 gma-u.5   102664467   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 gma-u.5   100807218   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 vvi-u.5   100241994   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 vvi-u.5   100253966   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 ppo-u.5   7476425   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 mtr-u.5   11433587   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 sly-u.5   101260329   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 sot-r.1   102601356   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 nta-r.1   142161603   pentatricopeptide repeat-containing protein At1g80550, mitochondrial-like 
 osa-u.5   4337182   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 zma-u.5   100274078   uncharacterized LOC100274078 
 tae-r.2   123047150   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 hvu-r.1   123428181   pentatricopeptide repeat-containing protein At1g80550, mitochondrial-like 
 sbi-r.1   8068469   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 
 bdi-r.1   100825476   pentatricopeptide repeat-containing protein At1g80550, mitochondrial 

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Top 50 coexpressed genes to 107914150 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107914150 (ghi-r.1 coexpression data)

CoexMap"107914150"


ghiLOC107914150 | Entrez gene ID : 107914150    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031930 [list] [network] mitochondria-nucleus signaling pathway  (21 genes)  IEA  
GO:0010019 [list] [network] chloroplast-nucleus signaling pathway  (25 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1647 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016698431.2 [sequence] [blastp]
XP_040958992.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 4,  cyto_mito 3,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_016698431.2)
cyto 6,  nucl 3,  cyto_E.R. 3,  cyto_plas 3  (predict for XP_040958992.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_016698431.2)
other 4,  chlo 3  (predict for XP_040958992.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107914150
ghi-r.1
for
107897281
ath-u.5
for
AT1G80550
bra-r.6
for
103832474
bna-r.1
for
106354841
bna-r.1
for
106430695
cit-r.1
for
102627298
gma-u.5
for
102664467
gma-u.5
for
100807218
vvi-u.5
for
100241994
vvi-u.5
for
100253966
ppo-u.5
for
7476425
mtr-u.5
for
11433587
sly-u.5
for
101260329
sot-r.1
for
102601356
nta-r.1
for
142161603
osa-u.5
for
4337182
zma-u.5
for
100274078
tae-r.2
for
123047150
hvu-r.1
for
123428181
sbi-r.1
for
8068469
bdi-r.1
for
100825476


Ortholog ID: 10564
Species ghi ghi ath bra bna bna cit gma gma vvi vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi
Symbol LOC107914150 LOC107897281 AT1G80550 LOC103832474 LOC106354841 LOC106430695 LOC102627298 LOC102664467 LOC100807218 LOC100241994 LOC100253966 LOC7476425 LOC11433587 LOC101260329 LOC102601356 LOC142161603 LOC4337182 LOC100274078 LOC123047150 LOC123428181 LOC8068469 LOC100825476
Function* pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial-like pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial-like pentatricopeptide repeat-containing protein At1g80550, mitochondrial uncharacterized LOC100274078 pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial-like pentatricopeptide repeat-containing protein At1g80550, mitochondrial pentatricopeptide repeat-containing protein At1g80550, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 2
hvu01230 Biosynthesis of amino acids 2
hvu04146 Peroxisome 2
hvu03010 Ribosome 2
hvu00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107914150 107897281 844394 103832474 106354841 106430695 102627298 102664467 100807218 100241994 100253966 7476425 11433587 101260329 102601356 142161603 4337182 100274078 123047150 123428181 8068469 100825476
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