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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107780719   uncharacterized LOC107780719 
 nta-r.1   107776468   uncharacterized LOC107776468 
 sly-u.5   101267645   uncharacterized LOC101267645 
 sot-r.1   102593449   putative TrmH family tRNA/rRNA methyltransferase 
 ath-u.5   AT4G15520   tRNA/rRNA methyltransferase (SpoU) family protein 
 gma-u.5   100305780   uncharacterized LOC100305780 
 bra-r.6   103870822   putative TrmH family tRNA/rRNA methyltransferase 
 bra-r.6   103860786   putative TrmH family tRNA/rRNA methyltransferase 
 vvi-u.5   100252797   uncharacterized LOC100252797 
 ppo-u.5   7469097   uncharacterized LOC7469097 
 mtr-u.5   11408462   putative TrmH family tRNA/rRNA methyltransferase 
 ghi-r.1   107897655   putative TrmH family tRNA/rRNA methyltransferase 
 ghi-r.1   107915084   putative TrmH family tRNA/rRNA methyltransferase 
 bna-r.1   106380630   putative TrmH family tRNA/rRNA methyltransferase 
 bna-r.1   106440039   putative TrmH family tRNA/rRNA methyltransferase 
 bna-r.1   106352551   putative TrmH family tRNA/rRNA methyltransferase 
 cit-r.1   102627025   uncharacterized LOC102627025 
 osa-u.5   4337763   uncharacterized LOC4337763 
 zma-u.5   100285504   uncharacterized LOC100285504 
 tae-r.2   123190742   putative TrmH family tRNA/rRNA methyltransferase 
 tae-r.2   123180375   putative TrmH family tRNA/rRNA methyltransferase 
 tae-r.2   123111037   putative TrmH family tRNA/rRNA methyltransferase 
 hvu-r.1   123424361   putative TrmH family tRNA/rRNA methyltransferase 
 sbi-r.1   8075948   putative TrmH family tRNA/rRNA methyltransferase 
 bdi-r.1   104582758   putative TrmH family tRNA/rRNA methyltransferase 
 cre-r.1   CHLRE_05g238950v5   uncharacterized protein 

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Top 50 coexpressed genes to 107780719 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107780719 (nta-r.1 coexpression data)

CoexMap"107780719"


ntaLOC107780719 | Entrez gene ID : 107780719    
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 1 1 1 2 1 1 1 2 3 1 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006396 [list] [network] RNA processing  (1135 genes)  IEA  
GO CC
GO MF
GO:0008173 [list] [network] RNA methyltransferase activity  (123 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
Protein XP_016456779.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 4  (predict for XP_016456779.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016456779.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107780719
nta-r.1
for
107776468
sly-u.5
for
101267645
sot-r.1
for
102593449
ath-u.5
for
AT4G15520
gma-u.5
for
100305780
bra-r.6
for
103870822
bra-r.6
for
103860786
vvi-u.5
for
100252797
ppo-u.5
for
7469097
mtr-u.5
for
11408462
ghi-r.1
for
107897655
ghi-r.1
for
107915084
bna-r.1
for
106380630
bna-r.1
for
106440039
bna-r.1
for
106352551
cit-r.1
for
102627025
osa-u.5
for
4337763
zma-u.5
for
100285504
tae-r.2
for
123190742
tae-r.2
for
123180375
tae-r.2
for
123111037
hvu-r.1
for
123424361
sbi-r.1
for
8075948
bdi-r.1
for
104582758
cre-r.1
for
CHLRE_05g238950v5


Ortholog ID: 9579
Species nta nta sly sot ath gma bra bra vvi ppo mtr ghi ghi bna bna bna cit osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107780719 LOC107776468 LOC101267645 LOC102593449 AT4G15520 LOC100305780 LOC103870822 LOC103860786 LOC100252797 LOC7469097 LOC11408462 LOC107897655 LOC107915084 LOC106380630 LOC106440039 LOC106352551 LOC102627025 LOC4337763 LOC100285504 LOC123190742 LOC123180375 LOC123111037 LOC123424361 LOC8075948 LOC104582758 CHLRE_05g238950v5
Function* uncharacterized LOC107780719 uncharacterized LOC107776468 uncharacterized LOC101267645 putative TrmH family tRNA/rRNA methyltransferase tRNA/rRNA methyltransferase (SpoU) family protein uncharacterized LOC100305780 putative TrmH family tRNA/rRNA methyltransferase putative TrmH family tRNA/rRNA methyltransferase uncharacterized LOC100252797 uncharacterized LOC7469097 putative TrmH family tRNA/rRNA methyltransferase putative TrmH family tRNA/rRNA methyltransferase putative TrmH family tRNA/rRNA methyltransferase putative TrmH family tRNA/rRNA methyltransferase putative TrmH family tRNA/rRNA methyltransferase putative TrmH family tRNA/rRNA methyltransferase uncharacterized LOC102627025 uncharacterized LOC4337763 uncharacterized LOC100285504 putative TrmH family tRNA/rRNA methyltransferase putative TrmH family tRNA/rRNA methyltransferase putative TrmH family tRNA/rRNA methyltransferase putative TrmH family tRNA/rRNA methyltransferase putative TrmH family tRNA/rRNA methyltransferase putative TrmH family tRNA/rRNA methyltransferase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta04141 Protein processing in endoplasmic reticulum 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma03040 Spliceosome 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03013 Nucleocytoplasmic transport 4
bra03015 mRNA surveillance pathway 4
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
osa03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03020 RNA polymerase 2
zma03010 Ribosome 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107780719 107776468 101267645 102593449 827225 100305780 103870822 103860786 100252797 7469097 11408462 107897655 107915084 106380630 106440039 106352551 102627025 4337763 100285504 123190742 123180375 123111037 123424361 8075948 104582758 5723334
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