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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107781437   ribosome biogenesis protein BOP1 homolog 
 nta-r.1   107792259   ribosome biogenesis protein BOP1 homolog 
 sly-u.5   101245591   ribosome biogenesis protein BOP1 homolog 
 sot-r.1   102596556   ribosome biogenesis protein BOP1 homolog 
 ath-u.5   AT2G40360   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100818497   ribosome biogenesis protein BOP1 homolog 
 gma-u.5   100803648   ribosome biogenesis protein BOP1 homolog 
 bra-r.6   103858155   ribosome biogenesis protein BOP1 homolog 
 vvi-u.5   100251720   ribosome biogenesis protein BOP1 homolog 
 ppo-u.5   18111184   ribosome biogenesis protein BOP1 homolog 
 ppo-u.5   18098304   ribosome biogenesis protein BOP1 homolog 
 mtr-u.5   11429211   ribosome biogenesis protein BOP1 homolog 
 ghi-r.1   107931324   ribosome biogenesis protein BOP1 homolog 
 ghi-r.1   107930755   ribosome biogenesis protein BOP1 homolog 
 bna-r.1   106450762   ribosome biogenesis protein BOP1 homolog 
 bna-r.1   106438235   ribosome biogenesis protein BOP1 homolog 
 bna-r.1   106396405   ribosome biogenesis protein BOP1 homolog 
 cit-r.1   102611280   ribosome biogenesis protein BOP1 homolog 
 osa-u.5   4343071   ribosome biogenesis protein BOP1 homolog 
 zma-u.5   100382622   ribosome biogenesis protein BOP1 homolog 
 tae-r.2   123104805   ribosome biogenesis protein BOP1 homolog 
 tae-r.2   123113088   ribosome biogenesis protein BOP1 homolog 
 tae-r.2   123122608   ribosome biogenesis protein BOP1 homolog 
 hvu-r.1   123451972   ribosome biogenesis protein BOP1 homolog 
 sbi-r.1   8086330   ribosome biogenesis protein BOP1 homolog 
 bdi-r.1   100822652   ribosome biogenesis protein BOP1 homolog 
 bdi-r.1   100839231   ribosome biogenesis protein BOP1 homolog 
 cre-r.1   CHLRE_10g417950v5   uncharacterized protein 

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Top 50 coexpressed genes to 107781437 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107781437 (nta-r.1 coexpression data)

CoexMap"107781437"


ntaLOC107781437 | Entrez gene ID : 107781437    
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 1 1 2 1 1 2 1 2 3 1 1 1 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000463 [list] [network] maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (44 genes)  IEA  
GO:0042254 [list] [network] ribosome biogenesis  (489 genes)  IEA  
GO CC
GO:0070545 [list] [network] PeBoW complex  (4 genes)  IEA  
GO:0030687 [list] [network] preribosome, large subunit precursor  (39 genes)  IEA  
GO MF
GO:0043021 [list] [network] ribonucleoprotein complex binding  (117 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016457622.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 1,  cyto 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_016457622.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016457622.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107781437
nta-r.1
for
107792259
sly-u.5
for
101245591
sot-r.1
for
102596556
ath-u.5
for
AT2G40360
gma-u.5
for
100818497
gma-u.5
for
100803648
bra-r.6
for
103858155
vvi-u.5
for
100251720
ppo-u.5
for
18111184
ppo-u.5
for
18098304
mtr-u.5
for
11429211
ghi-r.1
for
107931324
ghi-r.1
for
107930755
bna-r.1
for
106450762
bna-r.1
for
106438235
bna-r.1
for
106396405
cit-r.1
for
102611280
osa-u.5
for
4343071
zma-u.5
for
100382622
tae-r.2
for
123104805
tae-r.2
for
123113088
tae-r.2
for
123122608
hvu-r.1
for
123451972
sbi-r.1
for
8086330
bdi-r.1
for
100822652
bdi-r.1
for
100839231
cre-r.1
for
CHLRE_10g417950v5


Ortholog ID: 7543
Species nta nta sly sot ath gma gma bra vvi ppo ppo mtr ghi ghi bna bna bna cit osa zma tae tae tae hvu sbi bdi bdi cre
Symbol LOC107781437 LOC107792259 LOC101245591 LOC102596556 AT2G40360 LOC100818497 LOC100803648 LOC103858155 LOC100251720 LOC18111184 LOC18098304 LOC11429211 LOC107931324 LOC107930755 LOC106450762 LOC106438235 LOC106396405 LOC102611280 LOC4343071 LOC100382622 LOC123104805 LOC123113088 LOC123122608 LOC123451972 LOC8086330 LOC100822652 LOC100839231 CHLRE_10g417950v5
Function* ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog Transducin/WD40 repeat-like superfamily protein ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog ribosome biogenesis protein BOP1 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot03010 Ribosome 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 4
bna03008 Ribosome biogenesis in eukaryotes 3
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 4
bna03008 Ribosome biogenesis in eukaryotes 3
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
hvu03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107781437 107792259 101245591 102596556 818629 100818497 100803648 103858155 100251720 18111184 18098304 11429211 107931324 107930755 106450762 106438235 106396405 102611280 4343071 100382622 123104805 123113088 123122608 123451972 8086330 100822652 100839231 5728337
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