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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107783884   eukaryotic initiation factor 4A-10 
 sly-u.5   101266108   eukaryotic initiation factor 4A-2 
 sly-u.5   101266405   eukaryotic initiation factor 4A-2 
 sly-u.5   104648456   eukaryotic initiation factor 4A-9-like 
 ath-u.5   EIF4A1   eukaryotic translation initiation factor 4A1 
 ath-u.5   EIF4A-2   eif4a-2 
 ath-u.5   AT1G72730   DEA(D/H)-box RNA helicase family protein 
 gma-u.5   100806638   eukaryotic initiation factor 4A-11 
 gma-u.5   100817948   eukaryotic initiation factor 4A-10 
 gma-u.5   100809918   eukaryotic initiation factor 4A-10 
 vvi-u.5   100261822   eukaryotic initiation factor 4A-8 
 vvi-u.5   100249159   eukaryotic initiation factor 4A-11 
 ppo-u.5   7470684   eukaryotic initiation factor 4A-9 
 ppo-u.5   7480809   eukaryotic initiation factor 4A-8 
 ppo-u.5   112325060   eukaryotic initiation factor 4A-15 
 mtr-u.5   25494213   uncharacterized LOC25494213 
 mtr-u.5   11434749   eukaryotic initiation factor 4A-11 
 mtr-u.5   11418913   eukaryotic initiation factor 4A-10 
 osa-u.5   4328286   eukaryotic initiation factor 4A-3-like 
 osa-u.5   4341966   eukaryotic initiation factor 4A-1-like 
 zma-u.5   542348   translational initiation factor eIF-4A 
 zma-u.5   100284697   uncharacterized LOC100284697 
 zma-u.5   541649   translation initiation factor 

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Top 50 coexpressed genes to 107783884 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107783884 (nta-r.1 coexpression data)

CoexMap"107783884"


ntaLOC107783884 | Entrez gene ID : 107783884    
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 3 3 3 2 3 3 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003724 [list] [network] RNA helicase activity  (126 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3859 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (9393 genes)  IEA  
Protein NP_001312303.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  chlo 1,  pero 1  (predict for NP_001312303.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001312303.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107783884
sly-u.5
for
101266108
sly-u.5
for
101266405
sly-u.5
for
104648456
ath-u.5
for
EIF4A1
ath-u.5
for
EIF4A-2
ath-u.5
for
AT1G72730
gma-u.5
for
100806638
gma-u.5
for
100817948
gma-u.5
for
100809918
vvi-u.5
for
100261822
vvi-u.5
for
100249159
ppo-u.5
for
7470684
ppo-u.5
for
7480809
ppo-u.5
for
112325060
mtr-u.5
for
25494213
mtr-u.5
for
11434749
mtr-u.5
for
11418913
osa-u.5
for
4328286
osa-u.5
for
4341966
zma-u.5
for
542348
zma-u.5
for
100284697
zma-u.5
for
541649


Ortholog ID: 725
Species nta nta sly sly sot ath ath gma gma bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna cit osa zma zma tae tae hvu hvu sbi bdi bdi cre
Symbol LOC107777566 LOC107798115 LOC104648456 LOC101244494 LOC102595924 AT1G72730 EIF4A1 LOC112999960 LOC100817948 LOC103832621 LOC103871060 LOC100249159 LOC100261822 LOC7470684 LOC112325060 LOC11418913 LOC25494213 LOC107891725 LOC107920144 LOC125602317 LOC106405668 LOC102621232 LOC4328286 LOC100284697 LOC542348 LOC123137029 LOC123136268 LOC123407112 LOC123413668 LOC8063831 LOC100844546 LOC100843793 CHLRE_06g298650v5
Function* eukaryotic initiation factor 4A-9-like eukaryotic initiation factor 4A-14-like eukaryotic initiation factor 4A-9-like eukaryotic initiation factor 4A-8 eukaryotic initiation factor 4A-15 DEA(D/H)-box RNA helicase family protein eukaryotic translation initiation factor 4A1 eukaryotic initiation factor 4A-15 eukaryotic initiation factor 4A-10 eukaryotic initiation factor 4A-1 eukaryotic initiation factor 4A-1 eukaryotic initiation factor 4A-11 eukaryotic initiation factor 4A-8 eukaryotic initiation factor 4A-9 eukaryotic initiation factor 4A-15 eukaryotic initiation factor 4A-10 uncharacterized LOC25494213 eukaryotic initiation factor 4A-8 eukaryotic initiation factor 4A-14 eukaryotic initiation factor 4A-1-like eukaryotic initiation factor 4A-3 eukaryotic initiation factor 4A-8 eukaryotic initiation factor 4A-3-like uncharacterized LOC100284697 translational initiation factor eIF-4A uncharacterized LOC123137029 eukaryotic initiation factor 4A-like ATP-dependent RNA helicase drs1-like eukaryotic initiation factor 4A eukaryotic initiation factor 4A-3 eukaryotic initiation factor 4A eukaryotic initiation factor 4A-1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03010 Ribosome 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00510 N-Glycan biosynthesis 3
sly00513 Various types of N-glycan biosynthesis 3
sly04141 Protein processing in endoplasmic reticulum 3
sly04626 Plant-pathogen interaction 3
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 5
ath01240 Biosynthesis of cofactors 3
ath00520 Amino sugar and nucleotide sugar metabolism 3
ath01250 Biosynthesis of nucleotide sugars 3
ath00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 3
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma04145 Phagosome 2
gma04144 Endocytosis 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo03050 Proteasome 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 10
cit04120 Ubiquitin mediated proteolysis 3
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 3
osa03015 mRNA surveillance pathway 2
osa00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
zma03013 Nucleocytoplasmic transport 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 2
tae00310 Lysine degradation 2
tae00380 Tryptophan metabolism 2
tae00785 Lipoic acid metabolism 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu03013 Nucleocytoplasmic transport 2
hvu03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03040 Spliceosome 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
bdi04144 Endocytosis 3
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 15
cre01230 Biosynthesis of amino acids 3
cre03013 Nucleocytoplasmic transport 2
cre00220 Arginine biosynthesis 2
cre00250 Alanine, aspartate and glutamate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107777566 107798115 104648456 101244494 102595924 843605 820605 112999960 100817948 103832621 103871060 100249159 100261822 7470684 112325060 11418913 25494213 107891725 107920144 125602317 106405668 102621232 4328286 100284697 542348 123137029 123136268 123407112 123413668 8063831 100844546 100843793 5717011
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