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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107784254   cyclin-dependent protein kinase inhibitor SMR6-like 
 nta-r.1   107803056   cyclin-dependent protein kinase inhibitor SMR6-like 
 sly-u.5   101257136   uncharacterized LOC101257136 
 sly-u.5   101259901   cyclin-dependent protein kinase inhibitor SMR6 
 sot-r.1   102591380   uncharacterized LOC102591380 
 ath-u.5   AT5G40460   cyclin-dependent kinase inhibitor SMR3-like protein 
 ath-u.5   AT1G10690   cyclin-dependent kinase inhibitor 
 gma-u.5   100799997   cyclin-dependent protein kinase inhibitor SMR6 
 gma-u.5   100801316   cyclin-dependent protein kinase inhibitor SMR6 
 bra-r.6   103871851   cyclin-dependent protein kinase inhibitor SMR8 
 vvi-u.5   100268049   uncharacterized LOC100268049 
 vvi-u.5   100266480   cyclin-dependent protein kinase inhibitor SMR6 
 ppo-u.5   7469049   cyclin-dependent protein kinase inhibitor SMR6 
 ppo-u.5   7460759   cyclin-dependent protein kinase inhibitor SMR6 
 ppo-u.5   7461311   cyclin-dependent protein kinase inhibitor SMR6 
 mtr-u.5   25501448   cyclin-dependent protein kinase inhibitor SMR6 
 mtr-u.5   11434424   cyclin-dependent protein kinase inhibitor SMR6 
 mtr-u.5   11411968   cyclin-dependent protein kinase inhibitor SMR6 
 ghi-r.1   107928665   cyclin-dependent protein kinase inhibitor SMR6 
 ghi-r.1   107925994   cyclin-dependent protein kinase inhibitor SMR6 
 ghi-r.1   107946239   cyclin-dependent protein kinase inhibitor SMR6 
 cit-r.1   102619661   cyclin-dependent protein kinase inhibitor SMR6 
 cit-r.1   102611595   hypothetical protein 

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Top 50 coexpressed genes to 107784254 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107784254 (nta-r.1 coexpression data)

CoexMap"107784254"


ntaLOC107784254 | Entrez gene ID : 107784254      
Species nta sly sot ath gma bra vvi ppo mtr ghi cit zma cre sbi tae bna osa hvu bdi
Paralog 2 2 1 2 2 1 2 3 3 3 2 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032875 [list] [network] regulation of DNA endoreduplication  (7 genes)  IEA  
GO CC
GO MF
Protein XP_075100919.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for XP_075100919.1)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for XP_075100919.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107784254
nta-r.1
for
107803056
sly-u.5
for
101257136
sly-u.5
for
101259901
sot-r.1
for
102591380
ath-u.5
for
AT5G40460
ath-u.5
for
AT1G10690
gma-u.5
for
100799997
gma-u.5
for
100801316
bra-r.6
for
103871851
vvi-u.5
for
100268049
vvi-u.5
for
100266480
ppo-u.5
for
7469049
ppo-u.5
for
7460759
ppo-u.5
for
7461311
mtr-u.5
for
25501448
mtr-u.5
for
11434424
mtr-u.5
for
11411968
ghi-r.1
for
107928665
ghi-r.1
for
107925994
ghi-r.1
for
107946239
cit-r.1
for
102619661
cit-r.1
for
102611595


Ortholog ID: 3111
Species nta nta sly sly sot ath gma gma gma bra vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi cit cit
Symbol LOC107784254 LOC107803056 LOC101257136 LOC101259901 LOC102591380 AT1G10690 LOC100801316 LOC100820224 LOC100790537 LOC103871851 LOC100268049 LOC100266480 LOC7469049 LOC7460759 LOC7461311 LOC25501448 LOC11434424 LOC11411968 LOC121214749 LOC107893000 LOC102619661 LOC102611595
Function* cyclin-dependent protein kinase inhibitor SMR6-like cyclin-dependent protein kinase inhibitor SMR6-like uncharacterized LOC101257136 cyclin-dependent protein kinase inhibitor SMR6 uncharacterized LOC102591380 cyclin-dependent kinase inhibitor cyclin-dependent protein kinase inhibitor SMR6 cyclin-dependent protein kinase inhibitor SMR6 cyclin-dependent protein kinase inhibitor SMR6 cyclin-dependent protein kinase inhibitor SMR8 uncharacterized LOC100268049 cyclin-dependent protein kinase inhibitor SMR6 cyclin-dependent protein kinase inhibitor SMR6 cyclin-dependent protein kinase inhibitor SMR6 cyclin-dependent protein kinase inhibitor SMR6 cyclin-dependent protein kinase inhibitor SMR6 cyclin-dependent protein kinase inhibitor SMR6 cyclin-dependent protein kinase inhibitor SMR6 cyclin-dependent protein kinase inhibitor SMR6 cyclin-dependent protein kinase inhibitor SMR6 cyclin-dependent protein kinase inhibitor SMR6 hypothetical protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 8
gma03082 ATP-dependent chromatin remodeling 2
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 5
gma00240 Pyrimidine metabolism 3
gma01232 Nucleotide metabolism 3
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 2
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 2
ppo00230 Purine metabolism 2
ppo00240 Pyrimidine metabolism 2
ppo00480 Glutathione metabolism 2
ppo01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 10
mtr03420 Nucleotide excision repair 2
mtr03430 Mismatch repair 2
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 8
ghi03410 Base excision repair 6
ghi03420 Nucleotide excision repair 4
ghi03430 Mismatch repair 4
ghi03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
cit00052 Galactose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107784254 107803056 101257136 101259901 102591380 837612 100801316 100820224 100790537 103871851 100268049 100266480 7469049 7460759 7461311 25501448 11434424 11411968 121214749 107893000 102619661 102611595
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