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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107786199   ubiquitin carboxyl-terminal hydrolase 3 
 nta-r.1   107771406   ubiquitin carboxyl-terminal hydrolase 3-like 
 nta-r.1   107760663   ubiquitin carboxyl-terminal hydrolase 3 
 nta-r.1   107816171   ubiquitin carboxyl-terminal hydrolase 3 
 sly-u.5   101249374   ubiquitin carboxyl-terminal hydrolase 3 
 sly-u.5   101268896   ubiquitin carboxyl-terminal hydrolase 3-like 
 sot-r.1   102598496   ubiquitin carboxyl-terminal hydrolase isozyme L3-like 
 sot-r.1   102598097   ubiquitin carboxyl-terminal hydrolase isozyme L3-like 
 ath-u.5   UCH3   ubiquitin C-terminal hydrolase 3 
 gma-u.5   100527718   ubiquitin carboxyl-terminal hydrolase 3 
 gma-u.5   100527755   putative ubiquitin carboxyl-terminal hydrolase 
 gma-u.5   100816564   ubiquitin carboxyl-terminal hydrolase isozyme L3-like 
 bra-r.6   103855439   ubiquitin carboxyl-terminal hydrolase 3 
 bra-r.6   103860918   ubiquitin carboxyl-terminal hydrolase 3 
 vvi-u.5   100244786   ubiquitin carboxyl-terminal hydrolase 3 
 ppo-u.5   7471651   ubiquitin carboxyl-terminal hydrolase 3 
 mtr-u.5   11411905   ubiquitin carboxyl-terminal hydrolase 3 
 ghi-r.1   107939699   ubiquitin carboxyl-terminal hydrolase 3 
 ghi-r.1   107929329   ubiquitin carboxyl-terminal hydrolase 3 
 ghi-r.1   121224310   ubiquitin carboxyl-terminal hydrolase 3 
 bna-r.1   111214250   ubiquitin carboxyl-terminal hydrolase 3-like 
 bna-r.1   106440245   ubiquitin carboxyl-terminal hydrolase 3 
 bna-r.1   106427999   ubiquitin carboxyl-terminal hydrolase 3 
 cit-r.1   127898706   ubiquitin carboxyl-terminal hydrolase 3-like 
 cit-r.1   102612768   ubiquitin carboxyl-terminal hydrolase 3-like 
 cit-r.1   102611974   ubiquitin carboxyl-terminal hydrolase 3-like 
 osa-u.5   4337328   ubiquitin carboxyl-terminal hydrolase 3 
 osa-u.5   4336569   ubiquitin carboxyl-terminal hydrolase 3 
 osa-u.5   4330187   ubiquitin carboxyl-terminal hydrolase 3 
 zma-u.5   100282795   ubiquitin carboxyl-terminal hydrolase isozyme L3 
 zma-u.5   100272329   Ubiquitin carboxyl-terminal hydrolase 3 
 zma-u.5   100381623   uncharacterized LOC100381623 
 tae-r.2   123054091   ubiquitin carboxyl-terminal hydrolase 3 
 tae-r.2   123144987   ubiquitin carboxyl-terminal hydrolase 3 
 hvu-r.1   123428279   ubiquitin carboxyl-terminal hydrolase 3-like 
 hvu-r.1   123402193   ubiquitin carboxyl-terminal hydrolase 3-like 
 hvu-r.1   123427415   ubiquitin carboxyl-terminal hydrolase 3-like 
 sbi-r.1   8082570   ubiquitin carboxyl-terminal hydrolase 3 
 sbi-r.1   8083347   ubiquitin carboxyl-terminal hydrolase 3 
 sbi-r.1   8076243   ubiquitin carboxyl-terminal hydrolase 3 
 bdi-r.1   100844074   ubiquitin carboxyl-terminal hydrolase 3 
 bdi-r.1   100829656   ubiquitin carboxyl-terminal hydrolase 3 
 cre-r.1   CHLRE_03g194250v5   uncharacterized protein 

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Top 50 coexpressed genes to 107786199 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107786199 (nta-r.1 coexpression data)

CoexMap"107786199"


ntaLOC107786199 | Entrez gene ID : 107786199      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 4 2 2 1 3 2 1 1 1 3 3 3 3 3 2 3 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016579 [list] [network] protein deubiquitination  (133 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (520 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (8458 genes)  IEA  
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (106 genes)  IEA  
Protein XP_016463133.1 [sequence] [blastp]
XP_016463134.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  cyto 3,  chlo_mito 3  (predict for XP_016463133.1)
chlo 4,  mito 4,  chlo_mito 4  (predict for XP_016463134.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016463133.1)
other 8  (predict for XP_016463134.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107786199
nta-r.1
for
107771406
nta-r.1
for
107760663
nta-r.1
for
107816171
sly-u.5
for
101249374
sly-u.5
for
101268896
sot-r.1
for
102598496
sot-r.1
for
102598097
ath-u.5
for
UCH3
gma-u.5
for
100527718
gma-u.5
for
100527755
gma-u.5
for
100816564
bra-r.6
for
103855439
bra-r.6
for
103860918
vvi-u.5
for
100244786
ppo-u.5
for
7471651
mtr-u.5
for
11411905
ghi-r.1
for
107939699
ghi-r.1
for
107929329
ghi-r.1
for
121224310
bna-r.1
for
111214250
bna-r.1
for
106440245
bna-r.1
for
106427999
cit-r.1
for
127898706
cit-r.1
for
102612768
cit-r.1
for
102611974
osa-u.5
for
4337328
osa-u.5
for
4336569
osa-u.5
for
4330187
zma-u.5
for
100282795
zma-u.5
for
100272329
zma-u.5
for
100381623
tae-r.2
for
123054091
tae-r.2
for
123144987
hvu-r.1
for
123428279
hvu-r.1
for
123402193
hvu-r.1
for
123427415
sbi-r.1
for
8082570
sbi-r.1
for
8083347
sbi-r.1
for
8076243
bdi-r.1
for
100844074
bdi-r.1
for
100829656
cre-r.1
for
CHLRE_03g194250v5


Ortholog ID: 3360
Species nta nta nta sly sly sot sot ath gma gma gma bra bra vvi ppo mtr ghi ghi ghi bna bna bna cit cit cit osa osa osa zma zma zma tae tae hvu hvu hvu sbi sbi sbi bdi bdi cre
Symbol LOC107786199 LOC107771406 LOC107760663 LOC101249374 LOC101268896 LOC102598496 LOC102598097 UCH3 LOC100527718 LOC100527755 LOC100816564 LOC103855439 LOC103860918 LOC100244786 LOC7471651 LOC11411905 LOC107939699 LOC121224310 LOC107939903 LOC106440245 LOC106427999 LOC106381424 LOC127898706 LOC102612768 LOC102611974 LOC4337328 LOC4336569 LOC4330187 LOC100282795 LOC100272329 LOC100381623 LOC123054091 LOC123144987 LOC123428279 LOC123402193 LOC123427415 LOC8082570 LOC8083347 LOC8076243 LOC100844074 LOC100829656 CHLRE_03g194250v5
Function* ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3-like ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3-like ubiquitin carboxyl-terminal hydrolase isozyme L3-like ubiquitin carboxyl-terminal hydrolase isozyme L3-like ubiquitin C-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 putative ubiquitin carboxyl-terminal hydrolase ubiquitin carboxyl-terminal hydrolase isozyme L3-like ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3-like ubiquitin carboxyl-terminal hydrolase 3-like ubiquitin carboxyl-terminal hydrolase 3-like ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase isozyme L3 Ubiquitin carboxyl-terminal hydrolase 3 uncharacterized LOC100381623 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3-like ubiquitin carboxyl-terminal hydrolase 3-like ubiquitin carboxyl-terminal hydrolase 3-like ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 ubiquitin carboxyl-terminal hydrolase 3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 5
nta04142 Lysosome 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 14
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 3
sot03015 mRNA surveillance pathway 2
sot03083 Polycomb repressive complex 2
sot04120 Ubiquitin mediated proteolysis 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma03050 Proteasome 3
gma00010 Glycolysis / Gluconeogenesis 2
gma00270 Cysteine and methionine metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma03010 Ribosome 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00410 beta-Alanine metabolism 2
gma00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00071 Fatty acid degradation 3
bra00592 alpha-Linolenic acid metabolism 3
bra01040 Biosynthesis of unsaturated fatty acids 3
bra01212 Fatty acid metabolism 3
bra04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 11
vvi00020 Citrate cycle (TCA cycle) 3
vvi01200 Carbon metabolism 3
vvi00010 Glycolysis / Gluconeogenesis 2
vvi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 6
ppo04141 Protein processing in endoplasmic reticulum 2
ppo00190 Oxidative phosphorylation 2
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 10
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 10
ghi04016 MAPK signaling pathway - plant 6
ghi04070 Phosphatidylinositol signaling system 6
ghi04075 Plant hormone signal transduction 6
ghi04626 Plant-pathogen interaction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 6
bna04145 Phagosome 6
bna03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 6
bna04145 Phagosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03060 Protein export 2
cit04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03060 Protein export 2
cit04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit03050 Proteasome 3
cit03060 Protein export 2
cit04145 Phagosome 2
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03020 RNA polymerase 3
osa03420 Nucleotide excision repair 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04146 Peroxisome 3
zma00710 Carbon fixation by Calvin cycle 2
zma01200 Carbon metabolism 2
zma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma03018 RNA degradation 3
zma03040 Spliceosome 2
zma00260 Glycine, serine and threonine metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 5
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae00350 Tyrosine metabolism 3
tae00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
sbi01230 Biosynthesis of amino acids 2
sbi00053 Ascorbate and aldarate metabolism 2
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 8
sbi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03013 Nucleocytoplasmic transport 2
bdi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 17
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107786199 107771406 107760663 101249374 101268896 102598496 102598097 827466 100527718 100527755 100816564 103855439 103860918 100244786 7471651 11411905 107939699 121224310 107939903 106440245 106427999 106381424 127898706 102612768 102611974 4337328 4336569 4330187 100282795 100272329 100381623 123054091 123144987 123428279 123402193 123427415 8082570 8083347 8076243 100844074 100829656 5718718
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