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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107788408   putative ribose-5-phosphate isomerase 4, chloroplastic 
 sly-u.5   101266787   probable ribose-5-phosphate isomerase 4, chloroplastic 
 ath-u.5   AT5G44520   NagB/RpiA/CoA transferase-like superfamily protein 
 gma-u.5   100783936   probable ribose-5-phosphate isomerase 4, chloroplastic 
 vvi-u.5   100240835   probable ribose-5-phosphate isomerase 4, chloroplastic 
 ppo-u.5   7484701   probable ribose-5-phosphate isomerase 4, chloroplastic 
 mtr-u.5   11410188   probable ribose-5-phosphate isomerase 4, chloroplastic 
 zma-u.5   100285298   ribose-5-phosphate isomerase 

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Top 50 coexpressed genes to 107788408 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107788408 (nta-r.1 coexpression data)

CoexMap"107788408"


ntaLOC107788408 | Entrez gene ID : 107788408      
Species nta sly ath gma vvi ppo mtr zma bdi hvu bra cit bna sbi ghi osa sot cre tae
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta00030 [list] [network] Pentose phosphate pathway (111 genes)
nta00710 [list] [network] Carbon fixation by Calvin cycle (163 genes)
nta01200 [list] [network] Carbon metabolism (563 genes)
nta01230 [list] [network] Biosynthesis of amino acids (462 genes)
GO BP
GO:0009052 [list] [network] pentose-phosphate shunt, non-oxidative branch  (8 genes)  IEA  
GO CC
GO MF
GO:0004751 [list] [network] ribose-5-phosphate isomerase activity  (8 genes)  IEA  
Protein XP_016465579.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3  (predict for XP_016465579.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_016465579.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107788408
sly-u.5
for
101266787
ath-u.5
for
AT5G44520
gma-u.5
for
100783936
vvi-u.5
for
100240835
ppo-u.5
for
7484701
mtr-u.5
for
11410188
zma-u.5
for
100285298


Ortholog ID: 10358
Species nta nta sly sot ath gma bra vvi ppo mtr ghi ghi bna bna cit zma tae hvu sbi bdi cre
Symbol LOC107788408 LOC107770088 LOC101266787 LOC102580638 AT5G44520 LOC100783936 LOC103827896 LOC100240835 LOC7484701 LOC11410188 LOC107902045 LOC107929815 LOC125609868 LOC106380459 LOC102608472 LOC100285298 LOC123113519 LOC123452516 LOC8083931 LOC100828827 CHLRE_07g314600v5
Function* putative ribose-5-phosphate isomerase 4, chloroplastic putative ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic NagB/RpiA/CoA transferase-like superfamily protein probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic ribose-5-phosphate isomerase probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta00040 Pentose and glucuronate interconversions 2
nta00030 Pentose phosphate pathway 2
nta00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
nta00030 Pentose phosphate pathway 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 3
sly00195 Photosynthesis 3
sly00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 3
ghi03060 Protein export 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00860 Porphyrin metabolism 2
ghi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00100 Steroid biosynthesis 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00030 Pentose phosphate pathway 2
ghi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00030 Pentose phosphate pathway 2
bna00710 Carbon fixation by Calvin cycle 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna00030 Pentose phosphate pathway 2
bna00710 Carbon fixation by Calvin cycle 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 3
cit01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 3
zma00030 Pentose phosphate pathway 3
zma03010 Ribosome 3
zma00010 Glycolysis / Gluconeogenesis 2
zma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
tae00030 Pentose phosphate pathway 2
tae01230 Biosynthesis of amino acids 2
tae00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107788408 107770088 101266787 102580638 834479 100783936 103827896 100240835 7484701 11410188 107902045 107929815 125609868 106380459 102608472 100285298 123113519 123452516 8083931 100828827 5726523
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