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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107929815   probable ribose-5-phosphate isomerase 4, chloroplastic 
 ghi-r.1   107902045   probable ribose-5-phosphate isomerase 4, chloroplastic 
 ath-u.5   AT5G44520   NagB/RpiA/CoA transferase-like superfamily protein 
 bra-r.6   103827896   probable ribose-5-phosphate isomerase 4, chloroplastic 
 bna-r.1   106380459   probable ribose-5-phosphate isomerase 4, chloroplastic 
 bna-r.1   125609868   probable ribose-5-phosphate isomerase 4, chloroplastic 
 cit-r.1   102608472   probable ribose-5-phosphate isomerase 4, chloroplastic 
 gma-u.5   100783936   probable ribose-5-phosphate isomerase 4, chloroplastic 
 vvi-u.5   100240835   probable ribose-5-phosphate isomerase 4, chloroplastic 
 ppo-u.5   7484701   probable ribose-5-phosphate isomerase 4, chloroplastic 
 mtr-u.5   11410188   probable ribose-5-phosphate isomerase 4, chloroplastic 
 sly-u.5   101266787   probable ribose-5-phosphate isomerase 4, chloroplastic 
 sot-r.1   102580638   probable ribose-5-phosphate isomerase 4, chloroplastic 
 nta-r.1   107770088   putative ribose-5-phosphate isomerase 4, chloroplastic 
 nta-r.1   107788408   putative ribose-5-phosphate isomerase 4, chloroplastic 
 zma-u.5   100285298   ribose-5-phosphate isomerase 
 tae-r.2   123113519   probable ribose-5-phosphate isomerase 4, chloroplastic 
 tae-r.2   123105261   probable ribose-5-phosphate isomerase 4, chloroplastic 
 hvu-r.1   123452516   probable ribose-5-phosphate isomerase 4, chloroplastic 
 sbi-r.1   8083931   probable ribose-5-phosphate isomerase 4, chloroplastic 
 bdi-r.1   100828827   probable ribose-5-phosphate isomerase 4, chloroplastic 
 cre-r.1   CHLRE_07g314600v5   uncharacterized protein 

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Top 50 coexpressed genes to 107929815 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107929815 (ghi-r.1 coexpression data)

CoexMap"107929815"


ghiLOC107929815 | Entrez gene ID : 107929815    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta zma tae hvu sbi bdi cre osa
Paralog 2 1 1 2 1 1 1 1 1 1 1 2 1 2 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00030 [list] [network] Pentose phosphate pathway (139 genes)
ghi00710 [list] [network] Carbon fixation by Calvin cycle (194 genes)
ghi01200 [list] [network] Carbon metabolism (681 genes)
ghi01230 [list] [network] Biosynthesis of amino acids (568 genes)
GO BP
GO:0009052 [list] [network] pentose-phosphate shunt, non-oxidative branch  (24 genes)  IEA  
GO CC
GO MF
GO:0004751 [list] [network] ribose-5-phosphate isomerase activity  (12 genes)  IEA  
Protein XP_040971734.1 [sequence] [blastp]
XP_040971735.1 [sequence] [blastp]
XP_040971736.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for XP_040971734.1)
chlo 8,  nucl 1,  cyto 1,  mito 1,  cyto_nucl 1  (predict for XP_040971735.1)
chlo 6,  mito 2,  nucl 1  (predict for XP_040971736.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_040971734.1)
chlo 7  (predict for XP_040971735.1)
chlo 7  (predict for XP_040971736.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107929815
ghi-r.1
for
107902045
ath-u.5
for
AT5G44520
bra-r.6
for
103827896
bna-r.1
for
106380459
bna-r.1
for
125609868
cit-r.1
for
102608472
gma-u.5
for
100783936
vvi-u.5
for
100240835
ppo-u.5
for
7484701
mtr-u.5
for
11410188
sly-u.5
for
101266787
sot-r.1
for
102580638
nta-r.1
for
107770088
nta-r.1
for
107788408
zma-u.5
for
100285298
tae-r.2
for
123113519
tae-r.2
for
123105261
hvu-r.1
for
123452516
sbi-r.1
for
8083931
bdi-r.1
for
100828827
cre-r.1
for
CHLRE_07g314600v5


Ortholog ID: 10358
Species ghi ghi ath bra bna bna cit gma vvi ppo mtr sly sot nta nta zma tae tae hvu sbi bdi cre
Symbol LOC107929815 LOC107902045 AT5G44520 LOC103827896 LOC106380459 LOC125609868 LOC102608472 LOC100783936 LOC100240835 LOC7484701 LOC11410188 LOC101266787 LOC102580638 LOC107770088 LOC107788408 LOC100285298 LOC123113519 LOC123105261 LOC123452516 LOC8083931 LOC100828827 CHLRE_07g314600v5
Function* probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic NagB/RpiA/CoA transferase-like superfamily protein probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic putative ribose-5-phosphate isomerase 4, chloroplastic putative ribose-5-phosphate isomerase 4, chloroplastic ribose-5-phosphate isomerase probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic probable ribose-5-phosphate isomerase 4, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00100 Steroid biosynthesis 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00030 Pentose phosphate pathway 2
ghi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 3
ghi03060 Protein export 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00860 Porphyrin metabolism 2
ghi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna00030 Pentose phosphate pathway 2
bna00710 Carbon fixation by Calvin cycle 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00030 Pentose phosphate pathway 2
bna00710 Carbon fixation by Calvin cycle 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 3
cit01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 3
sly00195 Photosynthesis 3
sly00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
nta00030 Pentose phosphate pathway 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta00040 Pentose and glucuronate interconversions 2
nta00030 Pentose phosphate pathway 2
nta00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 3
zma00030 Pentose phosphate pathway 3
zma03010 Ribosome 3
zma00010 Glycolysis / Gluconeogenesis 2
zma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
tae00030 Pentose phosphate pathway 2
tae01230 Biosynthesis of amino acids 2
tae00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
tae00030 Pentose phosphate pathway 2
tae01230 Biosynthesis of amino acids 2
tae00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107929815 107902045 834479 103827896 106380459 125609868 102608472 100783936 100240835 7484701 11410188 101266787 102580638 107770088 107788408 100285298 123113519 123105261 123452516 8083931 100828827 5726523
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