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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107790132   mediator of RNA polymerase II transcription subunit 28-like 
 nta-r.1   107788891   mediator of RNA polymerase II transcription subunit 28 
 nta-r.1   107828792   mediator of RNA polymerase II transcription subunit 28 
 sly-u.5   101265053   mediator of RNA polymerase II transcription subunit 28-like 
 sly-u.5   101253808   mediator of RNA polymerase II transcription subunit 28-like 
 sot-r.1   102603486   mediator of RNA polymerase II transcription subunit 28-like 
 sot-r.1   102588900   mediator of RNA polymerase II transcription subunit 28-like 
 ath-u.5   AT3G52860   mediator of RNA polymerase II transcription subunit-like protein 
 gma-u.5   100815419   mediator of RNA polymerase II transcription subunit 28 
 gma-u.5   100789247   mediator of RNA polymerase II transcription subunit 28 
 bra-r.6   103841216   mediator of RNA polymerase II transcription subunit 28 
 vvi-u.5   100246950   mediator of RNA polymerase II transcription subunit 28 
 ppo-u.5   7491295   mediator of RNA polymerase II transcription subunit 28 
 mtr-u.5   11437169   mediator of RNA polymerase II transcription subunit 28 
 ghi-r.1   107946068   mediator of RNA polymerase II transcription subunit 28 
 ghi-r.1   107925676   mediator of RNA polymerase II transcription subunit 28 
 bna-r.1   106367809   mediator of RNA polymerase II transcription subunit 28 
 bna-r.1   106367931   mediator of RNA polymerase II transcription subunit 28-like 
 cit-r.1   102610177   mediator of RNA polymerase II transcription subunit 28 
 osa-u.5   4337847   mediator of RNA polymerase II transcription subunit 28 
 zma-u.5   100276705   uncharacterized LOC100276705 
 tae-r.2   123180563   mediator of RNA polymerase II transcription subunit 28 
 tae-r.2   123113633   mediator of RNA polymerase II transcription subunit 28 
 tae-r.2   123191672   mediator of RNA polymerase II transcription subunit 28 
 hvu-r.1   123425898   mediator of RNA polymerase II transcription subunit 28 
 sbi-r.1   8076010   mediator of RNA polymerase II transcription subunit 28 
 bdi-r.1   100840919   mediator of RNA polymerase II transcription subunit 28 

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Top 50 coexpressed genes to 107790132 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107790132 (nta-r.1 coexpression data)

CoexMap"107790132"


ntaLOC107790132 | Entrez gene ID : 107790132      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 2 2 1 2 1 1 1 1 2 2 1 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (2987 genes)  IEA  
GO CC
GO:0016592 [list] [network] mediator complex  (82 genes)  IEA  
GO MF
Protein XP_016467524.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  cyto 1,  vacu 1,  nucl 1,  cysk_nucl 1,  E.R._vacu 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_016467524.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016467524.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107790132
nta-r.1
for
107788891
nta-r.1
for
107828792
sly-u.5
for
101265053
sly-u.5
for
101253808
sot-r.1
for
102603486
sot-r.1
for
102588900
ath-u.5
for
AT3G52860
gma-u.5
for
100815419
gma-u.5
for
100789247
bra-r.6
for
103841216
vvi-u.5
for
100246950
ppo-u.5
for
7491295
mtr-u.5
for
11437169
ghi-r.1
for
107946068
ghi-r.1
for
107925676
bna-r.1
for
106367809
bna-r.1
for
106367931
cit-r.1
for
102610177
osa-u.5
for
4337847
zma-u.5
for
100276705
tae-r.2
for
123180563
tae-r.2
for
123113633
tae-r.2
for
123191672
hvu-r.1
for
123425898
sbi-r.1
for
8076010
bdi-r.1
for
100840919


Ortholog ID: 8505
Species nta nta nta sly sly sot sot ath gma gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae tae hvu sbi bdi
Symbol LOC107790132 LOC107788891 LOC107828792 LOC101265053 LOC101253808 LOC102603486 LOC102588900 AT3G52860 LOC100815419 LOC100789247 LOC103841216 LOC100246950 LOC7491295 LOC11437169 LOC107946068 LOC107925676 LOC106367809 LOC106367931 LOC102610177 LOC4337847 LOC100276705 LOC123180563 LOC123113633 LOC123191672 LOC123425898 LOC8076010 LOC100840919
Function* mediator of RNA polymerase II transcription subunit 28-like mediator of RNA polymerase II transcription subunit 28 mediator of RNA polymerase II transcription subunit 28 mediator of RNA polymerase II transcription subunit 28-like mediator of RNA polymerase II transcription subunit 28-like mediator of RNA polymerase II transcription subunit 28-like mediator of RNA polymerase II transcription subunit 28-like mediator of RNA polymerase II transcription subunit-like protein mediator of RNA polymerase II transcription subunit 28 mediator of RNA polymerase II transcription subunit 28 mediator of RNA polymerase II transcription subunit 28 mediator of RNA polymerase II transcription subunit 28 mediator of RNA polymerase II transcription subunit 28 mediator of RNA polymerase II transcription subunit 28 mediator of RNA polymerase II transcription subunit 28 mediator of RNA polymerase II transcription subunit 28 mediator of RNA polymerase II transcription subunit 28 mediator of RNA polymerase II transcription subunit 28-like mediator of RNA polymerase II transcription subunit 28 mediator of RNA polymerase II transcription subunit 28 uncharacterized LOC100276705 mediator of RNA polymerase II transcription subunit 28 mediator of RNA polymerase II transcription subunit 28 mediator of RNA polymerase II transcription subunit 28 mediator of RNA polymerase II transcription subunit 28 mediator of RNA polymerase II transcription subunit 28 mediator of RNA polymerase II transcription subunit 28
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
nta03040 Spliceosome 2
nta03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03420 Nucleotide excision repair 3
sly04120 Ubiquitin mediated proteolysis 3
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 5
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 3
mtr00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi03015 mRNA surveillance pathway 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi03015 mRNA surveillance pathway 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 2
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03020 RNA polymerase 3
osa03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
zma03020 RNA polymerase 2
zma03420 Nucleotide excision repair 2
zma03018 RNA degradation 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 6
tae03013 Nucleocytoplasmic transport 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 3
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107790132 107788891 107828792 101265053 101253808 102603486 102588900 824452 100815419 100789247 103841216 100246950 7491295 11437169 107946068 107925676 106367809 106367931 102610177 4337847 100276705 123180563 123113633 123191672 123425898 8076010 100840919
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