ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	107791617	clathrin heavy chain 1
sly-u.5	101250125	clathrin heavy chain 1
sly-u.5	101259922	clathrin heavy chain 1
sly-u.5	101259158	clathrin heavy chain 1
ath-u.5	AT3G08530	Clathrin, heavy chain
ath-u.5	AT3G11130	Clathrin, heavy chain
gma-u.5	547986	clathrin heavy chain
gma-u.5	100808189	clathrin heavy chain 1
gma-u.5	100776763	clathrin heavy chain 1
vvi-u.5	100256972	clathrin heavy chain 1-like
vvi-u.5	100251869	clathrin heavy chain 2
ppo-u.5	7494511	clathrin heavy chain 1
ppo-u.5	7454854	clathrin heavy chain 1
ppo-u.5	7474422	clathrin heavy chain 1
mtr-u.5	11408658	clathrin heavy chain 1
mtr-u.5	11411271	clathrin heavy chain 1
mtr-u.5	25490931	clathrin heavy chain 1
osa-u.5	4349546	clathrin heavy chain 1-like
osa-u.5	4351255	clathrin heavy chain 2-like
zma-u.5	103652644	clathrin heavy chain 1
zma-u.5	100193501	uncharacterized LOC100193501
zma-u.5	103640647	clathrin heavy chain 1

Top 50 coexpressed genes to 107791617 (nta-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107791617 (nta-r.1 coexpression data)

CoexMap"107791617"

[Cytoscape]

Annotation

functional annotation

KEGG

nta04142 [list] [network] Lysosome (163 genes)

nta04144 [list] [network] Endocytosis (334 genes)

nta05100 [list] [network] Bacterial invasion of epithelial cells (49 genes)

GO BP

GO:0006898 [list] [network] receptor-mediated endocytosis	(70 genes)	IEA
GO:0006886 [list] [network] intracellular protein transport	(499 genes)	IEA

GO CC

GO:0071439 [list] [network] clathrin complex	(6 genes)	IEA
GO:0030130 [list] [network] clathrin coat of trans-Golgi network vesicle	(22 genes)	IEA
GO:0030132 [list] [network] clathrin coat of coated pit	(23 genes)	IEA
GO:0009506 [list] [network] plasmodesma	(97 genes)	IEA
GO:0005794 [list] [network] Golgi apparatus	(771 genes)	IEA
GO:0009507 [list] [network] chloroplast	(1165 genes)	IEA
GO:0005886 [list] [network] plasma membrane	(1274 genes)	IEA

GO MF

GO:0032051 [list] [network] clathrin light chain binding	(6 genes)	IEA
GO:0005198 [list] [network] structural molecule activity	(995 genes)	IEA

Protein

XP_016469196.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, chlo 4

(predict for XP_016469196.1)

Subcellular
localization
TargetP

other 5, chlo 3

(predict for XP_016469196.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107791617	sly-u.5 for 101250125	sly-u.5 for 101259922	sly-u.5 for 101259158	ath-u.5 for AT3G08530	ath-u.5 for AT3G11130	gma-u.5 for 547986	gma-u.5 for 100808189	gma-u.5 for 100776763	vvi-u.5 for 100256972	vvi-u.5 for 100251869	ppo-u.5 for 7494511	ppo-u.5 for 7454854	ppo-u.5 for 7474422	mtr-u.5 for 11408658	mtr-u.5 for 11411271	mtr-u.5 for 25490931	osa-u.5 for 4349546	osa-u.5 for 4351255	zma-u.5 for 103652644	zma-u.5 for 100193501	zma-u.5 for 103640647

Ortholog

Ortholog ID: 1621

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

clathrin heavy chain 1

clathrin heavy chain 1-like

Clathrin, heavy chain

clathrin heavy chain 2

clathrin heavy chain 1-like

clathrin heavy chain 2

clathrin heavy chain 1

clathrin heavy chain 2

clathrin heavy chain 1

clathrin heavy chain 2

clathrin heavy chain 1

clathrin heavy chain 2-like

clathrin heavy chain 1-like

clathrin heavy chain 1

clathrin heavy chain 1-like

clathrin heavy chain 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04142	Lysosome	8
nta04144	Endocytosis	6
nta05100	Bacterial invasion of epithelial cells	6
nta00190	Oxidative phosphorylation	2
nta04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	10
nta05100	Bacterial invasion of epithelial cells	8
nta04142	Lysosome	6
nta04141	Protein processing in endoplasmic reticulum	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	4
sly04142	Lysosome	3
sly05100	Bacterial invasion of epithelial cells	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04142	Lysosome	4
sly04144	Endocytosis	4
sly05100	Bacterial invasion of epithelial cells	3
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	5
sot04142	Lysosome	3
sot05100	Bacterial invasion of epithelial cells	3
sot03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04142	Lysosome	5
sot04144	Endocytosis	5
sot05100	Bacterial invasion of epithelial cells	3
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04142	Lysosome	4
ath04144	Endocytosis	3
ath05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	5
ath04142	Lysosome	3
ath05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	7
gma04142	Lysosome	6
gma05100	Bacterial invasion of epithelial cells	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	7
gma05100	Bacterial invasion of epithelial cells	6
gma04142	Lysosome	4
gma03083	Polycomb repressive complex	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	3
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03013	Nucleocytoplasmic transport	2
vvi04144	Endocytosis	2
vvi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	4
vvi04141	Protein processing in endoplasmic reticulum	3
vvi04142	Lysosome	2
vvi05100	Bacterial invasion of epithelial cells	2
vvi00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	3
ppo04144	Endocytosis	3
ppo04141	Protein processing in endoplasmic reticulum	3
ppo05100	Bacterial invasion of epithelial cells	2
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	4
ppo04144	Endocytosis	4
ppo05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04142	Lysosome	2
mtr04144	Endocytosis	2
mtr05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	4
mtr04142	Lysosome	3
mtr05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	9
ghi04142	Lysosome	8
ghi05100	Bacterial invasion of epithelial cells	8
ghi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04142	Lysosome	8
ghi04144	Endocytosis	8
ghi05100	Bacterial invasion of epithelial cells	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04142	Lysosome	6
bna04144	Endocytosis	6
bna05100	Bacterial invasion of epithelial cells	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04142	Lysosome	8
bna04144	Endocytosis	8
bna05100	Bacterial invasion of epithelial cells	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	3
cit04144	Endocytosis	3
cit03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04142	Lysosome	4
osa04144	Endocytosis	4
osa05100	Bacterial invasion of epithelial cells	2
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	6
osa04142	Lysosome	3
osa05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04142	Lysosome	5
zma04144	Endocytosis	4
zma05100	Bacterial invasion of epithelial cells	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04142	Lysosome	6
zma04144	Endocytosis	5
zma05100	Bacterial invasion of epithelial cells	4
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	8
tae04144	Endocytosis	6
tae05100	Bacterial invasion of epithelial cells	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	6
tae04144	Endocytosis	6
tae05100	Bacterial invasion of epithelial cells	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	4
hvu05100	Bacterial invasion of epithelial cells	3
hvu04141	Protein processing in endoplasmic reticulum	3
hvu04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04142	Lysosome	3
hvu04144	Endocytosis	3
hvu04141	Protein processing in endoplasmic reticulum	3
hvu05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	3
sbi04142	Lysosome	2
sbi05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	4
sbi04142	Lysosome	2
sbi05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	5
bdi04142	Lysosome	3
bdi05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	5
bdi04142	Lysosome	2
bdi05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	6
cre04142	Lysosome	2

Expression

Expression pattern

Entrez Gene ID^*

107791617

107815448

101250125

101259922

102594928

102581452

820001

820284

100784651

100786715

103870773

103859264

100256972

100251869

7487811

7494511

11408658

11420719

121218572

107957301

106352384

106439169

102624350

4351255

4349546

103652644

103640647

123086338

123096679

123448143

123452830

8055484

8067576

100837941

100841671

5725357

The preparation time of this page was 0.1 [sec].


Species	nta	sly	ath	gma	vvi	ppo	mtr	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	cre	tae
Paralog	1	3	2	3	2	3	3	2	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107791617 (nta-r.1 coexpression data)

Top 50 enrichment test to 107791617 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**