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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107794773   pentatricopeptide repeat-containing protein At1g03560, mitochondrial 
 sly-u.5   101258499   pentatricopeptide repeat-containing protein At1g03560, mitochondrial 
 ath-u.5   AT1G03560   Pentatricopeptide repeat (PPR-like) superfamily protein 
 gma-u.5   100814463   pentatricopeptide repeat-containing protein At1g03560, mitochondrial 
 vvi-u.5   104880878   pentatricopeptide repeat-containing protein At1g03560, mitochondrial 
 ppo-u.5   18108585   pentatricopeptide repeat-containing protein At1g03560, mitochondrial 
 mtr-u.5   25501190   pentatricopeptide repeat-containing protein At1g03560, mitochondrial 
 osa-u.5   9268686   pentatricopeptide repeat-containing protein At1g03560, mitochondrial 
 zma-u.5   100381578   Pentatricopeptide repeat-containing protein mitochondrial 

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Top 50 coexpressed genes to 107794773 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107794773 (nta-r.1 coexpression data)

CoexMap"107794773"


ntaLOC107794773 | Entrez gene ID : 107794773    
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031930 [list] [network] mitochondria-nucleus signaling pathway  (26 genes)  IEA  
GO:0010019 [list] [network] chloroplast-nucleus signaling pathway  (28 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1165 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016472783.1 [sequence] [blastp]
XP_016472784.1 [sequence] [blastp]
XP_016472785.1 [sequence] [blastp]
XP_016472786.1 [sequence] [blastp]
XP_016472788.1 [sequence] [blastp]
XP_075102762.1 [sequence] [blastp]
XP_075102763.1 [sequence] [blastp]
XP_075102764.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  chlo_mito 4,  mito 3  (predict for XP_016472783.1)
chlo 5,  chlo_mito 4,  mito 3  (predict for XP_016472784.1)
chlo 5,  chlo_mito 4,  mito 3  (predict for XP_016472785.1)
chlo 5,  chlo_mito 4,  mito 3  (predict for XP_016472786.1)
chlo 5,  chlo_mito 4,  mito 3  (predict for XP_016472788.1)
chlo 5,  chlo_mito 4,  mito 3  (predict for XP_075102762.1)
chlo 5,  chlo_mito 4,  mito 3  (predict for XP_075102763.1)
chlo 5,  chlo_mito 4,  mito 3  (predict for XP_075102764.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_016472783.1)
chlo 7  (predict for XP_016472784.1)
chlo 7  (predict for XP_016472785.1)
chlo 7  (predict for XP_016472786.1)
chlo 7  (predict for XP_016472788.1)
chlo 7  (predict for XP_075102762.1)
chlo 7  (predict for XP_075102763.1)
chlo 7  (predict for XP_075102764.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107794773
sly-u.5
for
101258499
ath-u.5
for
AT1G03560
gma-u.5
for
100814463
vvi-u.5
for
104880878
ppo-u.5
for
18108585
mtr-u.5
for
25501190
osa-u.5
for
9268686
zma-u.5
for
100381578


Ortholog ID: 11780
Species nta nta sly sot ath gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae hvu sbi bdi
Symbol LOC107794773 LOC107780601 LOC101258499 LOC102594767 AT1G03560 LOC100814463 LOC103844495 LOC104880878 LOC18108585 LOC25501190 LOC107909261 LOC107886753 LOC106422914 LOC106400449 LOC102614020 LOC9268686 LOC100381578 LOC123190883 LOC123428242 LOC8068441 LOC100842097
Function* pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial-like pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial-like pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial Pentatricopeptide repeat-containing protein mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03250 Viral life cycle - HIV-1 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma01230 Biosynthesis of amino acids 3
gma00030 Pentose phosphate pathway 2
gma00710 Carbon fixation by Calvin cycle 2
gma00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 5
bra04145 Phagosome 4
bra04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
bna03250 Viral life cycle - HIV-1 6
bna04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
bna03250 Viral life cycle - HIV-1 6
bna04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 8
bdi01240 Biosynthesis of cofactors 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107794773 107780601 101258499 102594767 839458 100814463 103844495 104880878 18108585 25501190 107909261 107886753 106422914 106400449 102614020 9268686 100381578 123190883 123428242 8068441 100842097
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