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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8068441   pentatricopeptide repeat-containing protein At1g03560, mitochondrial 
 zma-u.5   100381578   Pentatricopeptide repeat-containing protein mitochondrial 
 osa-u.5   9268686   pentatricopeptide repeat-containing protein At1g03560, mitochondrial 
 ath-u.5   AT1G03560   Pentatricopeptide repeat (PPR-like) superfamily protein 
 gma-u.5   100814463   pentatricopeptide repeat-containing protein At1g03560, mitochondrial 
 sly-u.5   101258499   pentatricopeptide repeat-containing protein At1g03560, mitochondrial 
 vvi-u.5   104880878   pentatricopeptide repeat-containing protein At1g03560, mitochondrial 
 ppo-u.5   18108585   pentatricopeptide repeat-containing protein At1g03560, mitochondrial 
 mtr-u.5   25501190   pentatricopeptide repeat-containing protein At1g03560, mitochondrial 

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Top 50 coexpressed genes to 8068441 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8068441 (sbi-r.1 coexpression data)

CoexMap"8068441"


sbiLOC8068441 | Entrez gene ID : 8068441      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002447178.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  cyto_mito 3,  chlo 3,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_002447178.1)
Subcellular
localization
TargetP
mito 6,  other 4  (predict for XP_002447178.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8068441

.
zma-u.5
for
100381578

.
osa-u.5
for
9268686

.
ath-u.5
for
AT1G03560

.
gma-u.5
for
100814463

.
sly-u.5
for
101258499

.
vvi-u.5
for
104880878

.
ppo-u.5
for
18108585

.
mtr-u.5
for
25501190

.


Ortholog ID: 11780
Species ath gma sly osa zma bra vvi ppo mtr tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G03560 LOC100814463 LOC101258499 LOC9268686 LOC100381578 LOC103844495 LOC104880878 LOC18108585 LOC25501190 LOC123190883 LOC123428242 LOC107909261 LOC107886753 LOC106422914 LOC106400449 LOC8068441 LOC102594767 LOC102614020 LOC100842097 LOC107794773 LOC107780601
Function* Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial Pentatricopeptide repeat-containing protein mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial-like pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial pentatricopeptide repeat-containing protein At1g03560, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma01230 Biosynthesis of amino acids 3
gma00030 Pentose phosphate pathway 2
gma00710 Carbon fixation by Calvin cycle 2
gma00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 5
bra04145 Phagosome 4
bra04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
bna03250 Viral life cycle - HIV-1 6
bna04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
bna03250 Viral life cycle - HIV-1 6
bna04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 8
bdi01240 Biosynthesis of cofactors 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03250 Viral life cycle - HIV-1 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839458 100814463 101258499 9268686 100381578 103844495 104880878 18108585 25501190 123190883 123428242 107909261 107886753 106422914 106400449 8068441 102594767 102614020 100842097 107794773 107780601
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