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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107799409   U3 small nucleolar RNA-associated protein 18 homolog 
 sly-u.5   101256636   U3 small nucleolar RNA-associated protein 18 homolog 
 ath-u.5   AT5G14050   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100806692   U3 small nucleolar RNA-associated protein 18 homolog 
 gma-u.5   100806023   U3 small nucleolar RNA-associated protein 18 homolog 
 vvi-u.5   100244318   U3 small nucleolar RNA-associated protein 18 homolog 
 vvi-u.5   100263672   U3 small nucleolar RNA-associated protein 18 homolog 
 ppo-u.5   7476885   U3 small nucleolar RNA-associated protein 18 homolog 
 mtr-u.5   11442001   U3 small nucleolar RNA-associated protein 18 homolog 
 mtr-u.5   11425141   U3 small nucleolar RNA-associated protein 18 homolog 
 osa-u.5   4343836   U3 small nucleolar RNA-associated protein 18 homolog 
 zma-u.5   100193563   WD repeat-containing protein 50 

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Top 50 coexpressed genes to 107799409 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107799409 (nta-r.1 coexpression data)

CoexMap"107799409"


ntaLOC107799409 | Entrez gene ID : 107799409      
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 1 1 2 2 1 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta03008 [list] [network] Ribosome biogenesis in eukaryotes (157 genes)
GO BP
GO:0006364 [list] [network] rRNA processing  (360 genes)  IEA  
GO CC
GO:0034388 [list] [network] Pwp2p-containing subcomplex of 90S preribosome  (13 genes)  IEA  
GO:0032040 [list] [network] small-subunit processome  (85 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016478004.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 2,  cyto 2,  cysk_nucl 2  (predict for XP_016478004.2)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for XP_016478004.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107799409
sly-u.5
for
101256636
ath-u.5
for
AT5G14050
gma-u.5
for
100806692
gma-u.5
for
100806023
vvi-u.5
for
100244318
vvi-u.5
for
100263672
ppo-u.5
for
7476885
mtr-u.5
for
11442001
mtr-u.5
for
11425141
osa-u.5
for
4343836
zma-u.5
for
100193563


Ortholog ID: 6348
Species nta nta sly sot ath gma gma bra vvi vvi ppo mtr mtr ghi ghi bna bna cit osa zma tae tae hvu sbi sbi bdi cre
Symbol LOC107799409 LOC107798399 LOC101256636 LOC102587394 AT5G14050 LOC100806692 LOC100806023 LOC103846516 LOC100244318 LOC100263672 LOC7476885 LOC11442001 LOC11425141 LOC107941703 LOC107936215 LOC106418707 LOC106372243 LOC102630664 LOC4343836 LOC100193563 LOC123105405 LOC123113679 LOC123452712 LOC8065620 LOC8065621 LOC100834791 CHLRE_06g255950v5
Function* U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog Transducin/WD40 repeat-like superfamily protein U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog WD repeat-containing protein 50 U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03082 ATP-dependent chromatin remodeling 2
mtr03083 Polycomb repressive complex 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03020 RNA polymerase 3
bna00230 Purine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna00230 Purine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 9
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107799409 107798399 101256636 102587394 831254 100806692 100806023 103846516 100244318 100263672 7476885 11442001 11425141 107941703 107936215 106418707 106372243 102630664 4343836 100193563 123105405 123113679 123452712 8065620 8065621 100834791 5722125
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