Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107802736   zinc finger CCCH domain-containing protein 39 
 nta-r.1   107790545   zinc finger CCCH domain-containing protein 12 
 nta-r.1   107782654   zinc finger CCCH domain-containing protein 39-like 
 nta-r.1   107805049   zinc finger CCCH domain-containing protein 12-like 
 sly-u.5   101249238   zinc finger CCCH domain-containing protein 39-like 
 sly-u.5   101263122   zinc finger CCCH domain-containing protein 56 
 sot-r.1   102588348   zinc finger CCCH domain-containing protein 56-like 
 sot-r.1   102580124   zinc finger CCCH domain-containing protein 39-like 
 ath-u.5   AT2G35430   Zinc finger C-x8-C-x5-C-x3-H type family protein 
 ath-u.5   AT3G19360   Zinc finger (CCCH-type) family protein 
 ath-u.5   AT1G32360   Zinc finger (CCCH-type) family protein 
 gma-u.5   100780649   zinc finger CCCH domain-containing protein 39 
 gma-u.5   102665148   zinc finger CCCH domain-containing protein 12 
 bra-r.6   103837309   zinc finger CCCH domain-containing protein 39 
 bra-r.6   103874741   zinc finger CCCH domain-containing protein 12 
 bra-r.6   103859808   zinc finger CCCH domain-containing protein 39 
 vvi-u.5   100247398   zinc finger CCCH domain-containing protein 39 
 vvi-u.5   100262704   zinc finger CCCH domain-containing protein 12 
 vvi-u.5   104880257   zinc finger CCCH domain-containing protein 39 
 ppo-u.5   18094153   zinc finger CCCH domain-containing protein 12 
 ppo-u.5   7491864   zinc finger CCCH domain-containing protein 12 
 ghi-r.1   107924364   zinc finger CCCH domain-containing protein 12 
 ghi-r.1   107939431   zinc finger CCCH domain-containing protein 39 
 ghi-r.1   107946756   zinc finger CCCH domain-containing protein 12 
 bna-r.1   125601587   zinc finger CCCH domain-containing protein 28-like 
 bna-r.1   106439518   zinc finger CCCH domain-containing protein 39-like 
 bna-r.1   125585465   zinc finger CCCH domain-containing protein 28-like 
 cit-r.1   102619881   zinc finger CCCH domain-containing protein 39 
 cit-r.1   102626224   zinc finger CCCH domain-containing protein 12 
 osa-u.5   4344715   zinc finger CCCH domain-containing protein 56 
 zma-u.5   100193200   uncharacterized LOC100193200 
 tae-r.2   123147249   zinc finger CCCH domain-containing protein 56 
 tae-r.2   123157300   zinc finger CCCH domain-containing protein 56 
 tae-r.2   123165620   zinc finger CCCH domain-containing protein 56 
 hvu-r.1   123408711   zinc finger CCCH domain-containing protein 56 
 sbi-r.1   8080851   zinc finger CCCH domain-containing protein 56 
 bdi-r.1   100835128   zinc finger CCCH domain-containing protein 56 
 bdi-r.1   100834329   zinc finger CCCH domain-containing protein 56 
 cre-r.1   CHLRE_11g476200v5   uncharacterized protein 

close


Top 50 coexpressed genes to 107802736 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107802736 (nta-r.1 coexpression data)

CoexMap"107802736"


ntaLOC107802736 | Entrez gene ID : 107802736      
Species nta sly sot ath gma bra vvi ppo ghi bna cit osa zma tae hvu sbi bdi cre mtr
Paralog 4 2 2 3 2 3 3 2 3 3 2 1 1 3 1 1 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (573 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (4462 genes)  IEA  
Protein XP_016481777.1 [sequence] [blastp]
XP_016481779.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_016481777.1)
nucl 9  (predict for XP_016481779.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016481777.1)
other 8  (predict for XP_016481779.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107802736
nta-r.1
for
107790545
nta-r.1
for
107782654
nta-r.1
for
107805049
sly-u.5
for
101249238
sly-u.5
for
101263122
sot-r.1
for
102588348
sot-r.1
for
102580124
ath-u.5
for
AT2G35430
ath-u.5
for
AT3G19360
ath-u.5
for
AT1G32360
gma-u.5
for
100780649
gma-u.5
for
102665148
bra-r.6
for
103837309
bra-r.6
for
103874741
bra-r.6
for
103859808
vvi-u.5
for
100247398
vvi-u.5
for
100262704
vvi-u.5
for
104880257
ppo-u.5
for
18094153
ppo-u.5
for
7491864
ghi-r.1
for
107924364
ghi-r.1
for
107939431
ghi-r.1
for
107946756
bna-r.1
for
125601587
bna-r.1
for
106439518
bna-r.1
for
125585465
cit-r.1
for
102619881
cit-r.1
for
102626224
osa-u.5
for
4344715
zma-u.5
for
100193200
tae-r.2
for
123147249
tae-r.2
for
123157300
tae-r.2
for
123165620
hvu-r.1
for
123408711
sbi-r.1
for
8080851
bdi-r.1
for
100835128
bdi-r.1
for
100834329
cre-r.1
for
CHLRE_11g476200v5


Ortholog ID: 1695
Species nta nta nta sly sly sot ath ath ath gma gma bra bra bra vvi vvi vvi ppo ppo ppo ghi ghi ghi bna bna bna cit cit osa zma tae tae tae hvu sbi bdi bdi cre
Symbol LOC107804698 LOC107783171 LOC107793213 LOC101249238 LOC101263122 LOC102580124 AT2G35430 AT3G19360 AT1G32360 LOC100780649 LOC102665148 LOC103837309 LOC103859808 LOC103840167 LOC100247398 LOC100262704 LOC104880257 LOC18094153 LOC7491864 LOC7472142 LOC107939431 LOC107946756 LOC107953711 LOC125601587 LOC106379792 LOC106374659 LOC102619881 LOC102626224 LOC4344715 LOC100193200 LOC123147249 LOC123157300 LOC123165620 LOC123408711 LOC8080851 LOC100835128 LOC100834329 CHLRE_11g476200v5
Function* zinc finger CCCH domain-containing protein 12 zinc finger CCCH domain-containing protein 39 zinc finger CCCH domain-containing protein 39-like zinc finger CCCH domain-containing protein 39-like zinc finger CCCH domain-containing protein 56 zinc finger CCCH domain-containing protein 39-like Zinc finger C-x8-C-x5-C-x3-H type family protein Zinc finger (CCCH-type) family protein Zinc finger (CCCH-type) family protein zinc finger CCCH domain-containing protein 39 zinc finger CCCH domain-containing protein 12 zinc finger CCCH domain-containing protein 39 zinc finger CCCH domain-containing protein 39 zinc finger CCCH domain-containing protein 12 zinc finger CCCH domain-containing protein 39 zinc finger CCCH domain-containing protein 12 zinc finger CCCH domain-containing protein 39 zinc finger CCCH domain-containing protein 12 zinc finger CCCH domain-containing protein 12 zinc finger CCCH domain-containing protein 39 zinc finger CCCH domain-containing protein 39 zinc finger CCCH domain-containing protein 12 zinc finger CCCH domain-containing protein 39 zinc finger CCCH domain-containing protein 28-like zinc finger CCCH domain-containing protein 39 zinc finger CCCH domain-containing protein 39 zinc finger CCCH domain-containing protein 39 zinc finger CCCH domain-containing protein 12 zinc finger CCCH domain-containing protein 56 uncharacterized LOC100193200 zinc finger CCCH domain-containing protein 56 zinc finger CCCH domain-containing protein 56 zinc finger CCCH domain-containing protein 56 zinc finger CCCH domain-containing protein 56 zinc finger CCCH domain-containing protein 56 zinc finger CCCH domain-containing protein 56 zinc finger CCCH domain-containing protein 56 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04070 Phosphatidylinositol signaling system 3
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00999 Biosynthesis of various plant secondary metabolites 5
nta00460 Cyanoamino acid metabolism 4
nta00500 Starch and sucrose metabolism 4
nta00230 Purine metabolism 2
nta00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03015 mRNA surveillance pathway 4
sly03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03008 Ribosome biogenesis in eukaryotes 3
gma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 5
gma03040 Spliceosome 4
gma03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 4
vvi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi04626 Plant-pathogen interaction 2
ghi03060 Protein export 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 4
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi04626 Plant-pathogen interaction 2
ghi03060 Protein export 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03018 RNA degradation 4
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03420 Nucleotide excision repair 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 10
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107804698 107783171 107793213 101249238 101263122 102580124 818109 821470 840128 100780649 102665148 103837309 103859808 103840167 100247398 100262704 104880257 18094153 7491864 7472142 107939431 107946756 107953711 125601587 106379792 106374659 102619881 102626224 4344715 100193200 123147249 123157300 123165620 123408711 8080851 100835128 100834329 66055317
The preparation time of this page was 1.6 [sec].