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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107803229   pentatricopeptide repeat-containing protein At1g74750 
 nta-r.1   107796619   pentatricopeptide repeat-containing protein At1g74750-like 
 sly-u.5   101268561   pentatricopeptide repeat-containing protein At1g74750-like 
 sot-r.1   102591791   pentatricopeptide repeat-containing protein At1g74750-like 
 ath-u.5   AT1G18900   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   AT1G74750   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100819996   pentatricopeptide repeat-containing protein At1g18900 
 gma-u.5   100785113   pentatricopeptide repeat-containing protein At1g74750 
 gma-u.5   100781029   pentatricopeptide repeat-containing protein At1g18900 
 bra-r.6   103831936   pentatricopeptide repeat-containing protein At1g74750 
 bra-r.6   103835875   pentatricopeptide repeat-containing protein At1g18900 
 bra-r.6   103872697   pentatricopeptide repeat-containing protein At1g18900 
 vvi-u.5   100251827   pentatricopeptide repeat-containing protein At1g74750 
 ppo-u.5   7474846   pentatricopeptide repeat-containing protein At1g18900 
 mtr-u.5   25488891   pentatricopeptide repeat-containing protein At1g74750 
 ghi-r.1   107912154   pentatricopeptide repeat-containing protein At1g74750 
 ghi-r.1   121209612   pentatricopeptide repeat-containing protein At1g74750-like 
 bna-r.1   125610255   pentatricopeptide repeat-containing protein At1g18900-like 
 bna-r.1   106431858   pentatricopeptide repeat-containing protein At1g18900 
 bna-r.1   106419365   pentatricopeptide repeat-containing protein At1g18900 
 cit-r.1   102612162   pentatricopeptide repeat-containing protein At1g74750 
 osa-u.5   4352912   pentatricopeptide repeat-containing protein At1g74750 
 zma-u.5   100272697   uncharacterized LOC100272697 
 tae-r.2   123119038   pentatricopeptide repeat-containing protein At1g18900 
 tae-r.2   123172668   pentatricopeptide repeat-containing protein At1g18900 
 tae-r.2   123101931   pentatricopeptide repeat-containing protein At1g18900 
 hvu-r.1   123452090   pentatricopeptide repeat-containing protein At1g18900-like 
 sbi-r.1   8072878   pentatricopeptide repeat-containing protein At1g18900 
 bdi-r.1   100832383   pentatricopeptide repeat-containing protein At1g18900 

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Top 50 coexpressed genes to 107803229 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107803229 (nta-r.1 coexpression data)

CoexMap"107803229"


ntaLOC107803229 | Entrez gene ID : 107803229      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 3 3 1 1 1 2 3 1 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016482360.1 [sequence] [blastp]
XP_075107765.1 [sequence] [blastp]
XP_075107766.1 [sequence] [blastp]
XP_075107767.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 2  (predict for XP_016482360.1)
chlo 7,  nucl 2  (predict for XP_075107765.1)
chlo 7,  nucl 2  (predict for XP_075107766.1)
chlo 7,  nucl 2  (predict for XP_075107767.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_016482360.1)
mito 6  (predict for XP_075107765.1)
mito 6  (predict for XP_075107766.1)
mito 6  (predict for XP_075107767.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107803229
nta-r.1
for
107796619
sly-u.5
for
101268561
sot-r.1
for
102591791
ath-u.5
for
AT1G18900
ath-u.5
for
AT1G74750
gma-u.5
for
100819996
gma-u.5
for
100785113
gma-u.5
for
100781029
bra-r.6
for
103831936
bra-r.6
for
103835875
bra-r.6
for
103872697
vvi-u.5
for
100251827
ppo-u.5
for
7474846
mtr-u.5
for
25488891
ghi-r.1
for
107912154
ghi-r.1
for
121209612
bna-r.1
for
125610255
bna-r.1
for
106431858
bna-r.1
for
106419365
cit-r.1
for
102612162
osa-u.5
for
4352912
zma-u.5
for
100272697
tae-r.2
for
123119038
tae-r.2
for
123172668
tae-r.2
for
123101931
hvu-r.1
for
123452090
sbi-r.1
for
8072878
bdi-r.1
for
100832383


Ortholog ID: 6401
Species nta nta sly sot ath ath gma gma gma bra bra bra vvi ppo mtr ghi ghi bna bna bna cit osa zma tae tae tae hvu sbi bdi
Symbol LOC107803229 LOC107796619 LOC101268561 LOC102591791 AT1G18900 AT1G74750 LOC100819996 LOC100785113 LOC100781029 LOC103831936 LOC103872697 LOC103830686 LOC100251827 LOC7474846 LOC25488891 LOC107912154 LOC121209612 LOC125610255 LOC106387238 LOC106357277 LOC102612162 LOC4352912 LOC100272697 LOC123119038 LOC123172668 LOC123101931 LOC123452090 LOC8072878 LOC100832383
Function* pentatricopeptide repeat-containing protein At1g74750 pentatricopeptide repeat-containing protein At1g74750-like pentatricopeptide repeat-containing protein At1g74750-like pentatricopeptide repeat-containing protein At1g74750-like Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g18900 pentatricopeptide repeat-containing protein At1g74750 pentatricopeptide repeat-containing protein At1g18900 pentatricopeptide repeat-containing protein At1g74750 pentatricopeptide repeat-containing protein At1g18900 pentatricopeptide repeat-containing protein At1g74750 pentatricopeptide repeat-containing protein At1g74750 pentatricopeptide repeat-containing protein At1g18900 pentatricopeptide repeat-containing protein At1g74750 pentatricopeptide repeat-containing protein At1g74750 pentatricopeptide repeat-containing protein At1g74750-like pentatricopeptide repeat-containing protein At1g18900-like pentatricopeptide repeat-containing protein At1g74750-like pentatricopeptide repeat-containing protein At1g74750 pentatricopeptide repeat-containing protein At1g74750 pentatricopeptide repeat-containing protein At1g74750 uncharacterized LOC100272697 pentatricopeptide repeat-containing protein At1g18900 pentatricopeptide repeat-containing protein At1g18900 pentatricopeptide repeat-containing protein At1g18900 pentatricopeptide repeat-containing protein At1g18900-like pentatricopeptide repeat-containing protein At1g18900 pentatricopeptide repeat-containing protein At1g18900
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 2
nta00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 2
nta00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00730 Thiamine metabolism 2
gma01240 Biosynthesis of cofactors 2
gma04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma02010 ABC transporters 2
gma00730 Thiamine metabolism 2
gma01240 Biosynthesis of cofactors 2
gma04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 3
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 4
ghi01212 Fatty acid metabolism 4
ghi00190 Oxidative phosphorylation 3
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 3
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 4
zma03008 Ribosome biogenesis in eukaryotes 2
zma04712 Circadian rhythm - plant 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00330 Arginine and proline metabolism 3
tae03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 2
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107803229 107796619 101268561 102591791 838471 843814 100819996 100785113 100781029 103831936 103872697 103830686 100251827 7474846 25488891 107912154 121209612 125610255 106387238 106357277 102612162 4352912 100272697 123119038 123172668 123101931 123452090 8072878 100832383
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