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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107805046   DNA mismatch repair protein MSH6 
 sly-u.5   112941390   DNA mismatch repair protein MSH6 
 ath-u.5   MSH6   MUTS homolog 6 
 gma-u.5   100811104   DNA mismatch repair protein MSH6 
 vvi-u.5   100255608   DNA mismatch repair protein MSH6 
 ppo-u.5   112326168   DNA mismatch repair protein MSH6 
 mtr-u.5   11432526   DNA mismatch repair protein MSH6 
 osa-u.5   4347016   DNA mismatch repair protein MSH6 
 zma-u.5   542626   mismatch binding protein Mus3 

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Top 50 coexpressed genes to 107805046 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107805046 (nta-r.1 coexpression data)

CoexMap"107805046"


ntaLOC107805046 | Entrez gene ID : 107805046      
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta03430 [list] [network] Mismatch repair (63 genes)
GO BP
GO:0006298 [list] [network] mismatch repair  (35 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4980 genes)  IEA  
GO MF
GO:0030983 [list] [network] mismatched DNA binding  (31 genes)  IEA  
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (48 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3859 genes)  IEA  
Protein XP_016484506.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  mito 2  (predict for XP_016484506.1)
Subcellular
localization
TargetP
chlo 8,  mito 3  (predict for XP_016484506.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107805046
sly-u.5
for
112941390
ath-u.5
for
MSH6
gma-u.5
for
100811104
vvi-u.5
for
100255608
ppo-u.5
for
112326168
mtr-u.5
for
11432526
osa-u.5
for
4347016
zma-u.5
for
542626


Ortholog ID: 10207
Species nta nta sly sot ath gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi cre
Symbol LOC107805046 LOC107825338 LOC112941390 LOC102602160 MSH6 LOC100811104 LOC103858779 LOC100255608 LOC112326168 LOC11432526 LOC107909991 LOC107954361 LOC125606942 LOC106426511 LOC102627728 LOC4347016 LOC542626 LOC542977 LOC123121484 LOC123396435 LOC8055803 LOC100821236 CHLRE_05g235750v5
Function* DNA mismatch repair protein MSH6 DNA mismatch repair protein MSH6 DNA mismatch repair protein MSH6 DNA mismatch repair protein MSH6 MUTS homolog 6 DNA mismatch repair protein MSH6 DNA mismatch repair protein MSH6 DNA mismatch repair protein MSH6 DNA mismatch repair protein MSH6 DNA mismatch repair protein MSH6 DNA mismatch repair protein MSH6 DNA mismatch repair protein MSH6 DNA mismatch repair protein MSH6 DNA mismatch repair protein MSH6 DNA mismatch repair protein MSH6 DNA mismatch repair protein MSH6 mismatch binding protein Mus3 DNA mismatch repair protein MSH6 DNA mismatch repair protein MSH6 DNA mismatch repair protein MSH6 DNA mismatch repair protein MSH6 DNA mismatch repair protein MSH6 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03410 Base excision repair 2
nta03440 Homologous recombination 2
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03410 Base excision repair 2
nta03440 Homologous recombination 2
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 4
sot03430 Mismatch repair 3
sot03440 Homologous recombination 3
sot03460 Fanconi anemia pathway 2
sot03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 7
ath03430 Mismatch repair 4
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
ath03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 7
gma03430 Mismatch repair 4
gma03410 Base excision repair 3
gma03420 Nucleotide excision repair 3
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03430 Mismatch repair 4
bra03030 DNA replication 2
bra03410 Base excision repair 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03430 Mismatch repair 3
ppo03030 DNA replication 3
ppo03460 Fanconi anemia pathway 2
ppo03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 10
mtr03420 Nucleotide excision repair 2
mtr03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 6
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 6
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03430 Mismatch repair 7
bna04075 Plant hormone signal transduction 2
bna04626 Plant-pathogen interaction 2
bna03030 DNA replication 2
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03430 Mismatch repair 5
bna04075 Plant hormone signal transduction 2
bna04626 Plant-pathogen interaction 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 3
zma03018 RNA degradation 3
zma03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 10
tae03430 Mismatch repair 9
tae03410 Base excision repair 6
tae03420 Nucleotide excision repair 6
tae03440 Homologous recombination 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 8
tae03030 DNA replication 7
tae03440 Homologous recombination 6
tae03410 Base excision repair 5
tae03420 Nucleotide excision repair 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03430 Mismatch repair 2
hvu03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi00230 Purine metabolism 2
bdi00240 Pyrimidine metabolism 2
bdi00480 Glutathione metabolism 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 9
cre03410 Base excision repair 5
cre03420 Nucleotide excision repair 5
cre03430 Mismatch repair 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107805046 107825338 112941390 102602160 828147 100811104 103858779 100255608 112326168 11432526 107909991 107954361 125606942 106426511 102627728 4347016 542626 542977 123121484 123396435 8055803 100821236 5723369
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