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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107810216   meiotic recombination protein DMC1 homolog 
 nta-r.1   107762441   meiotic recombination protein DMC1 homolog 
 sly-u.5   101259196   meiotic recombination protein DMC1 homolog 
 sot-r.1   102594747   meiotic recombination protein DMC1 homolog 
 ath-u.5   DMC1   DNA repair (Rad51) family protein 
 bra-r.6   103834269   meiotic recombination protein DMC1 homolog 
 ppo-u.5   7498054   meiotic recombination protein DMC1 homolog 
 ghi-r.1   107928479   meiotic recombination protein DMC1 homolog 
 ghi-r.1   107929171   meiotic recombination protein DMC1 homolog 
 bna-r.1   106363427   meiotic recombination protein DMC1 homolog 
 bna-r.1   106436497   meiotic recombination protein DMC1 homolog 
 cit-r.1   102627316   meiotic recombination protein DMC1 homolog 
 osa-u.5   4351482   meiotic recombination protein DMC1 homolog 
 osa-u.5   4349763   meiotic recombination protein DMC1 homolog B 
 zma-u.5   100273470   meiotic recombination protein DMC1 
 tae-r.2   123111208   meiotic recombination protein DMC1 homolog B 
 tae-r.2   100192177   meiotic recombination protein DMC1 homolog B 
 hvu-r.1   123395860   meiotic recombination protein DMC1 homolog B 
 sbi-r.1   8078314   meiotic recombination protein DMC1 homolog 
 sbi-r.1   8071400   meiotic recombination protein DMC1 homolog 
 cre-r.1   CHLRE_02g141846v5   uncharacterized protein 

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Top 50 coexpressed genes to 107810216 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107810216 (nta-r.1 coexpression data)

CoexMap"107810216"


ntaLOC107810216 | Entrez gene ID : 107810216    
Species nta sly sot ath bra ppo ghi bna cit osa zma tae hvu sbi cre gma vvi bdi mtr
Paralog 2 1 1 1 1 1 2 2 1 2 1 2 1 2 1 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000730 [list] [network] DNA recombinase assembly  (6 genes)  IEA  
GO:0042148 [list] [network] DNA strand invasion  (11 genes)  IEA  
GO:0006312 [list] [network] mitotic recombination  (15 genes)  IEA  
GO:0070192 [list] [network] chromosome organization involved in meiotic cell cycle  (33 genes)  IEA  
GO:0007131 [list] [network] reciprocal meiotic recombination  (67 genes)  IEA  
GO:0006281 [list] [network] DNA repair  (695 genes)  IEA  
GO CC
GO:0000794 [list] [network] condensed nuclear chromosome  (15 genes)  IEA  
GO:0005634 [list] [network] nucleus  (4980 genes)  IEA  
GO MF
GO:0000150 [list] [network] DNA strand exchange activity  (4 genes)  IEA  
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (48 genes)  IEA  
GO:0003697 [list] [network] single-stranded DNA binding  (117 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (824 genes)  IEA  
GO:0003690 [list] [network] double-stranded DNA binding  (968 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3859 genes)  IEA  
Protein NP_001312784.1 [sequence] [blastp]
XP_016490460.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 6,  cyto 3,  cysk_plas 3  (predict for NP_001312784.1)
cyto 7,  cysk_nucl 1,  chlo 1,  nucl 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_016490460.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001312784.1)
other 8  (predict for XP_016490460.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107810216
nta-r.1
for
107762441
sly-u.5
for
101259196
sot-r.1
for
102594747
ath-u.5
for
DMC1
bra-r.6
for
103834269
ppo-u.5
for
7498054
ghi-r.1
for
107928479
ghi-r.1
for
107929171
bna-r.1
for
106363427
bna-r.1
for
106436497
cit-r.1
for
102627316
osa-u.5
for
4351482
osa-u.5
for
4349763
zma-u.5
for
100273470
tae-r.2
for
123111208
tae-r.2
for
100192177
hvu-r.1
for
123395860
sbi-r.1
for
8078314
sbi-r.1
for
8071400
cre-r.1
for
CHLRE_02g141846v5


Ortholog ID: 8959
Species nta nta sly sot ath bra ppo ghi ghi bna bna cit osa osa zma tae tae hvu sbi sbi cre
Symbol LOC107810216 LOC107762441 LOC101259196 LOC102594747 DMC1 LOC103834269 LOC7498054 LOC107928479 LOC107929171 LOC106363427 LOC106436497 LOC102627316 LOC4351482 LOC4349763 LOC100273470 LOC123111208 LOC100192177 LOC123395860 LOC8078314 LOC8071400 CHLRE_02g141846v5
Function* meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog DNA repair (Rad51) family protein meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog B meiotic recombination protein DMC1 meiotic recombination protein DMC1 homolog B meiotic recombination protein DMC1 homolog B meiotic recombination protein DMC1 homolog B meiotic recombination protein DMC1 homolog meiotic recombination protein DMC1 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00460 Cyanoamino acid metabolism 3
sot00500 Starch and sucrose metabolism 3
sot00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 3
ghi03460 Fanconi anemia pathway 3
ghi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04070 Phosphatidylinositol signaling system 4
bna04075 Plant hormone signal transduction 4
bna04626 Plant-pathogen interaction 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04070 Phosphatidylinositol signaling system 4
bna04075 Plant hormone signal transduction 4
bna04626 Plant-pathogen interaction 4
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01210 2-Oxocarboxylic acid metabolism 3
hvu01230 Biosynthesis of amino acids 3
hvu00020 Citrate cycle (TCA cycle) 2
hvu00480 Glutathione metabolism 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00520 Amino sugar and nucleotide sugar metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107810216 107762441 101259196 102594747 821860 103834269 7498054 107928479 107929171 106363427 106436497 102627316 4351482 4349763 100273470 123111208 100192177 123395860 8078314 8071400 5726032
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