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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107817285   histone deacetylase 2 
 sly-u.5   101261348   histone deacetylase 2 
 ath-u.5   HDA2   histone deacetylase 2 
 gma-u.5   HDA18   histone deacetylase 
 vvi-u.5   100264550   histone deacetylase 2 
 ppo-u.5   18100651   histone deacetylase 2 
 mtr-u.5   11414514   histone deacetylase 2 
 osa-u.5   4341352   histone deacetylase 2 
 zma-u.5   100277470   uncharacterized LOC100277470 

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Top 50 coexpressed genes to 107817285 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107817285 (nta-r.1 coexpression data)

CoexMap"107817285"


ntaLOC107817285 | Entrez gene ID : 107817285      
Species nta sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi tae cre sot
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0040029 [list] [network] epigenetic regulation of gene expression  (96 genes)  IEA  
GO CC
GO:0000118 [list] [network] histone deacetylase complex  (52 genes)  IEA  
GO MF
GO:0004407 [list] [network] histone deacetylase activity  (24 genes)  IEA  
Protein XP_016498571.2 [sequence] [blastp]
XP_016498572.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 4,  pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_016498571.2)
cyto 5,  nucl 2,  pero 2  (predict for XP_016498572.2)
Subcellular
localization
TargetP
other 7  (predict for XP_016498571.2)
other 7  (predict for XP_016498572.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107817285
sly-u.5
for
101261348
ath-u.5
for
HDA2
gma-u.5
for
HDA18
vvi-u.5
for
100264550
ppo-u.5
for
18100651
mtr-u.5
for
11414514
osa-u.5
for
4341352
zma-u.5
for
100277470


Ortholog ID: 10328
Species nta nta sly sot ath gma vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi sbi bdi cre
Symbol LOC107817285 LOC107816878 LOC101261348 LOC102595280 HDA2 HDA18 LOC100264550 LOC18100651 LOC11414514 LOC107893401 LOC107937978 LOC106348560 LOC106348753 LOC102630752 LOC4341352 LOC100277470 LOC123148039 LOC123165082 LOC123407315 LOC8085534 LOC8079300 LOC100833556 CHLRE_03g158200v5
Function* histone deacetylase 2 histone deacetylase 2-like histone deacetylase 2 histone deacetylase 2 histone deacetylase 2 histone deacetylase histone deacetylase 2 histone deacetylase 2 histone deacetylase 2 histone deacetylase 2 histone deacetylase 2 histone deacetylase 2 histone deacetylase 2 histone deacetylase 2 histone deacetylase 2 uncharacterized LOC100277470 histone deacetylase 2 histone deacetylase 2 histone deacetylase 2 histone deacetylase 2 histone deacetylase 2 histone deacetylase 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 4
bna04120 Ubiquitin mediated proteolysis 3
bna03010 Ribosome 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 4
bna04120 Ubiquitin mediated proteolysis 2
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00030 Pentose phosphate pathway 3
tae00480 Glutathione metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00030 Pentose phosphate pathway 3
tae00480 Glutathione metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre02010 ABC transporters 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107817285 107816878 101261348 102595280 832673 100781276 100264550 18100651 11414514 107893401 107937978 106348560 106348753 102630752 4341352 100277470 123148039 123165082 123407315 8085534 8079300 100833556 5723029
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