ATTED-II : GeneCoexpression result

Species	Gene	Description
nta-r.1	107784254	cyclin-dependent protein kinase inhibitor SMR6-like
sly-u.5	101257136	uncharacterized LOC101257136
sly-u.5	101259901	cyclin-dependent protein kinase inhibitor SMR6
sot-r.1	102591380	uncharacterized LOC102591380
ath-u.5	AT5G40460	cyclin-dependent kinase inhibitor SMR3-like protein
ath-u.5	AT1G10690	cyclin-dependent kinase inhibitor
gma-u.5	100799997	cyclin-dependent protein kinase inhibitor SMR6
gma-u.5	100801316	cyclin-dependent protein kinase inhibitor SMR6
bra-r.6	103871851	cyclin-dependent protein kinase inhibitor SMR8
vvi-u.5	100268049	uncharacterized LOC100268049
vvi-u.5	100266480	cyclin-dependent protein kinase inhibitor SMR6
ppo-u.5	7469049	cyclin-dependent protein kinase inhibitor SMR6
ppo-u.5	7460759	cyclin-dependent protein kinase inhibitor SMR6
ppo-u.5	7461311	cyclin-dependent protein kinase inhibitor SMR6
mtr-u.5	25501448	cyclin-dependent protein kinase inhibitor SMR6
mtr-u.5	11434424	cyclin-dependent protein kinase inhibitor SMR6
mtr-u.5	11411968	cyclin-dependent protein kinase inhibitor SMR6
ghi-r.1	107928665	cyclin-dependent protein kinase inhibitor SMR6
ghi-r.1	107925994	cyclin-dependent protein kinase inhibitor SMR6
ghi-r.1	107946239	cyclin-dependent protein kinase inhibitor SMR6
cit-r.1	102619661	cyclin-dependent protein kinase inhibitor SMR6
cit-r.1	102611595	hypothetical protein

Annotation

functional annotation

KEGG

GO BP

GO:0032875 [list] [network] regulation of DNA endoreduplication

(7 genes)

IEA

GO CC

GO MF

Protein

XP_016498687.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 3, chlo 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2

(predict for XP_016498687.1)

Subcellular
localization
TargetP

other 8

(predict for XP_016498687.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107784254	sly-u.5 for 101257136	sly-u.5 for 101259901	sot-r.1 for 102591380	ath-u.5 for AT5G40460	ath-u.5 for AT1G10690	gma-u.5 for 100799997	gma-u.5 for 100801316	bra-r.6 for 103871851	vvi-u.5 for 100268049	vvi-u.5 for 100266480	ppo-u.5 for 7469049	ppo-u.5 for 7460759	ppo-u.5 for 7461311	mtr-u.5 for 25501448	mtr-u.5 for 11434424	mtr-u.5 for 11411968	ghi-r.1 for 107928665	ghi-r.1 for 107925994	ghi-r.1 for 107946239	cit-r.1 for 102619661	cit-r.1 for 102611595

Ortholog

Ortholog ID: 3111

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

cit

Symbol

Function^*

cyclin-dependent protein kinase inhibitor SMR6-like

uncharacterized LOC101257136

cyclin-dependent protein kinase inhibitor SMR6

uncharacterized LOC102591380

cyclin-dependent kinase inhibitor

cyclin-dependent protein kinase inhibitor SMR6

cyclin-dependent protein kinase inhibitor SMR8

uncharacterized LOC100268049

cyclin-dependent protein kinase inhibitor SMR6

hypothetical protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03030	DNA replication	8
gma03082	ATP-dependent chromatin remodeling	2
gma00240	Pyrimidine metabolism	2
gma01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03030	DNA replication	5
gma00240	Pyrimidine metabolism	3
gma01232	Nucleotide metabolism	3
gma03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	2
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01230	Biosynthesis of amino acids	2
vvi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03030	DNA replication	2
ppo00230	Purine metabolism	2
ppo00240	Pyrimidine metabolism	2
ppo00480	Glutathione metabolism	2
ppo01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	2
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03030	DNA replication	10
mtr03420	Nucleotide excision repair	2
mtr03430	Mismatch repair	2
mtr03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	8
ghi03410	Base excision repair	6
ghi03420	Nucleotide excision repair	4
ghi03430	Mismatch repair	4
ghi03440	Homologous recombination	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	2
cit00052	Galactose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107784254

107803056

101257136

101259901

102591380

837612

100801316

100820224

100790537

103871851

100268049

100266480

7469049

7460759

7461311

25501448

11434424

11411968

121214749

107893000

102619661

102611595

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107784254 (nta-r.1 coexpression data)

Top 50 enrichment test to 107784254 (nta-r.1 coexpression data)


Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	cit	osa	bdi	tae	zma	sbi	hvu	cre	bna
Paralog	1	2	1	2	2	1	2	3	3	3	2	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107784254 (nta-r.1 coexpression data)

Top 50 enrichment test to 107784254 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**