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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107822665   chloride channel protein CLC-e 
 sly-u.5   606305   putative chloride channel protein 
 sly-u.5   101252124   chloride channel protein CLC-f-like 
 sly-u.5   101259489   chloride channel protein CLC-e 
 ath-u.5   CLC-E   chloride channel E 
 ath-u.5   CLC-F   chloride channel F 
 gma-u.5   100777943   chloride channel protein CLC-f 
 gma-u.5   100787625   chloride channel protein CLC-f 
 gma-u.5   100796023   chloride channel protein CLC-f 
 vvi-u.5   100266917   chloride channel ClC2 
 vvi-u.5   100253731   chloride channel ClC7 
 ppo-u.5   18098186   chloride channel protein CLC-e 
 ppo-u.5   7471717   chloride channel protein CLC-f 
 mtr-u.5   25488515   chloride channel protein CLC-f 
 mtr-u.5   11425304   chloride channel protein CLC-e 
 osa-u.5   9267257   chloride channel protein CLC-e 
 osa-u.5   4345939   chloride channel protein CLC-f 
 osa-u.5   4330553   chloride channel protein CLC-f 
 zma-u.5   103627661   chloride channel protein CLC-f 
 zma-u.5   103651283   chloride channel protein CLC-e 
 zma-u.5   100279218   uncharacterized LOC100279218 

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Top 50 coexpressed genes to 107822665 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107822665 (nta-r.1 coexpression data)

CoexMap"107822665"


ntaLOC107822665 | Entrez gene ID : 107822665      
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 3 2 3 2 2 2 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006821 [list] [network] chloride transport  (21 genes)  IEA  
GO:0015074 [list] [network] DNA integration  (733 genes)  IEA  
GO:0055085 [list] [network] transmembrane transport  (1864 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (195 genes)  IEA  
GO MF
GO:0015108 [list] [network] chloride transmembrane transporter activity  (25 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (9393 genes)  IEA  
Protein XP_075094112.1 [sequence] [blastp]
XP_075094113.1 [sequence] [blastp]
XP_075094114.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_075094112.1)
plas 6,  vacu 2,  chlo 1,  extr 1,  E.R. 1  (predict for XP_075094113.1)
chlo 10  (predict for XP_075094114.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_075094112.1)
other 7  (predict for XP_075094113.1)
chlo 9  (predict for XP_075094114.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107822665
sly-u.5
for
606305
sly-u.5
for
101252124
sly-u.5
for
101259489
ath-u.5
for
CLC-E
ath-u.5
for
CLC-F
gma-u.5
for
100777943
gma-u.5
for
100787625
gma-u.5
for
100796023
vvi-u.5
for
100266917
vvi-u.5
for
100253731
ppo-u.5
for
18098186
ppo-u.5
for
7471717
mtr-u.5
for
25488515
mtr-u.5
for
11425304
osa-u.5
for
9267257
osa-u.5
for
4345939
osa-u.5
for
4330553
zma-u.5
for
103627661
zma-u.5
for
103651283
zma-u.5
for
100279218


Ortholog ID: 2042
Species nta nta sly sly sot sot ath ath gma gma bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna cit cit osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107770372 LOC107760449 LOC101252124 LOC606305 LOC102592091 LOC102591882 CLC-E CLC-F LOC100796023 LOC100812959 LOC103871031 LOC103828107 LOC100253731 LOC100266917 LOC18098186 LOC7471717 LOC11425304 LOC25488515 LOC107951362 LOC121209362 LOC106396427 LOC106345777 LOC102620991 LOC102620548 LOC4330553 LOC9267257 LOC100275204 LOC103627661 LOC123061768 LOC123145318 LOC123402245 LOC123407624 LOC8071767 LOC8069763 LOC100833796 LOC100833604 CHLRE_01g037150v5
Function* chloride channel protein CLC-f chloride channel protein CLC-f chloride channel protein CLC-f-like putative chloride channel protein chloride channel protein CLC-e chloride channel protein CLC-f-like chloride channel E chloride channel F chloride channel protein CLC-f chloride channel protein CLC-e chloride channel protein CLC-f chloride channel protein CLC-e chloride channel ClC7 chloride channel ClC2 chloride channel protein CLC-e chloride channel protein CLC-f chloride channel protein CLC-e chloride channel protein CLC-f chloride channel protein CLC-f chloride channel protein CLC-f chloride channel protein CLC-f chloride channel protein CLC-f chloride channel protein CLC-e chloride channel protein CLC-f chloride channel protein CLC-f chloride channel protein CLC-e uncharacterized LOC100275204 chloride channel protein CLC-f chloride channel protein CLC-e chloride channel protein CLC-f chloride channel protein CLC-f-like chloride channel protein CLC-f chloride channel protein CLC-f chloride channel protein CLC-e chloride channel protein CLC-f chloride channel protein CLC-f uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 4
sot00510 N-Glycan biosynthesis 3
sot00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 2
ath01250 Biosynthesis of nucleotide sugars 2
ath00230 Purine metabolism 2
ath00240 Pyrimidine metabolism 2
ath01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 4
bra04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00260 Glycine, serine and threonine metabolism 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00730 Thiamine metabolism 2
ppo01240 Biosynthesis of cofactors 2
ppo00640 Propanoate metabolism 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 2
ppo00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi04075 Plant hormone signal transduction 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi04075 Plant hormone signal transduction 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 4
osa01240 Biosynthesis of cofactors 4
osa01250 Biosynthesis of nucleotide sugars 4
osa00240 Pyrimidine metabolism 3
osa01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu00520 Amino sugar and nucleotide sugar metabolism 3
hvu04144 Endocytosis 2
hvu01250 Biosynthesis of nucleotide sugars 2
hvu04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107770372 107760449 101252124 606305 102592091 102591882 829696 842011 100796023 100812959 103871031 103828107 100253731 100266917 18098186 7471717 11425304 25488515 107951362 121209362 106396427 106345777 102620991 102620548 4330553 9267257 100275204 103627661 123061768 123145318 123402245 123407624 8071767 8069763 100833796 100833604 5715492
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