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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107823694   pentatricopeptide repeat-containing protein At2g20540 
 sly-u.5   101259567   pentatricopeptide repeat-containing protein At3g29230-like 
 gma-u.5   100799232   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 vvi-u.5   100267844   putative pentatricopeptide repeat-containing protein At5g37570 
 mtr-u.5   25493557   pentatricopeptide repeat-containing protein At3g29230 
 osa-u.5   4347017   pentatricopeptide repeat-containing protein At4g02750 
 zma-u.5   103632560   pentatricopeptide repeat-containing protein 

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Top 50 coexpressed genes to 107823694 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107823694 (nta-r.1 coexpression data)

CoexMap"107823694"


ntaLOC107823694 | Entrez gene ID : 107823694      
Species nta sly gma vvi mtr osa zma hvu bna cit bra ghi ppo sbi bdi ath tae cre sot
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016505872.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  mito 2,  cyto_mito 1,  nucl_plas 1  (predict for XP_016505872.1)
Subcellular
localization
TargetP
other 6  (predict for XP_016505872.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107823694
sly-u.5
for
101259567
gma-u.5
for
100799232
vvi-u.5
for
100267844
mtr-u.5
for
25493557
osa-u.5
for
4347017
zma-u.5
for
103632560


Ortholog ID: 11858
Species nta nta sly sot gma bra vvi mtr ghi ghi cit osa zma tae tae hvu sbi bdi
Symbol LOC107823694 LOC107779926 LOC101259567 LOC102606241 LOC100799232 LOC103858332 LOC100267844 LOC25493557 LOC107886382 LOC107920181 LOC102619133 LOC4347017 LOC103632560 LOC123167530 LOC123148640 LOC123426747 LOC8065479 LOC100835598
Function* pentatricopeptide repeat-containing protein At2g20540 pentatricopeptide repeat-containing protein At2g20540-like pentatricopeptide repeat-containing protein At3g29230-like pentatricopeptide repeat-containing protein At3g29230-like pentatricopeptide repeat-containing protein At1g08070, chloroplastic pentatricopeptide repeat-containing protein At4g18840 putative pentatricopeptide repeat-containing protein At5g37570 pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At3g29230 pentatricopeptide repeat-containing protein At3g29230 putative pentatricopeptide repeat-containing protein At5g37570 pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At2g44880-like pentatricopeptide repeat-containing protein At2g44880 pentatricopeptide repeat-containing protein At4g02750-like pentatricopeptide repeat-containing protein At4g02750 pentatricopeptide repeat-containing protein At4g02750
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107823694 107779926 101259567 102606241 100799232 103858332 100267844 25493557 107886382 107920181 102619133 4347017 103632560 123167530 123148640 123426747 8065479 100835598
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