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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1  107824841  putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial 
 nta-r.1  107771664  pentatricopeptide repeat-containing protein At5g27110-like 
 sly-u.5  101253876  pentatricopeptide repeat-containing protein At1g18485-like 
 sot-r.1  102595447  pentatricopeptide repeat-containing protein At4g14170-like 
 gma-u.5  100780689  putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial 
 mtr-u.5  25488894  pentatricopeptide repeat-containing protein At3g16610 
 ghi-r.1  107959278  pentatricopeptide repeat-containing protein DOT4, chloroplastic 
 cit-r.1  102623126  pentatricopeptide repeat-containing protein At1g18485-like 
 osa-u.5  4351907  pentatricopeptide repeat-containing protein At5g27110 
 tae-r.2  123191001  pentatricopeptide repeat-containing protein At1g18485 
 tae-r.2  123055151  pentatricopeptide repeat-containing protein At1g18485 
 hvu-r.1  123431216  pentatricopeptide repeat-containing protein At1g18485-like 
 sbi-r.1  8061060  pentatricopeptide repeat-containing protein At1g18485 

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Top 50 coexpressed genes to 107824841 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107824841 (nta-r.1 coexpression data)

CoexMap"107824841"


ntaLOC107824841 | Entrez gene ID : 107824841
Species nta sly sot gma mtr ghi cit osa tae hvu sbi bdi vvi bra ppo ath zma cre bna
Paralog 2 1 1 1 1 1 1 1 2 1 1 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016507135.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  mito 1,  E.R. 1  (predict for XP_016507135.2)
Subcellular
localization
TargetP
mito 4  (predict for XP_016507135.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

nta-r.1
for
107824841


nta-r.1
for
107771664


sly-u.5
for
101253876


sot-r.1
for
102595447


gma-u.5
for
100780689


mtr-u.5
for
25488894


ghi-r.1
for
107959278


cit-r.1
for
102623126


osa-u.5
for
4351907


tae-r.2
for
123191001


tae-r.2
for
123055151


hvu-r.1
for
123431216


sbi-r.1
for
8061060



Ortholog ID: 12825
Species nta nta sly sot gma mtr ghi cit osa tae tae hvu sbi
Symbol LOC107824841 LOC107771664 LOC101253876 LOC102595447 LOC100780689 LOC25488894 LOC107959278 LOC102623126 LOC4351907 LOC123191001 LOC123055151 LOC123431216 LOC8061060
Function* putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial pentatricopeptide repeat-containing protein At5g27110-like pentatricopeptide repeat-containing protein At1g18485-like pentatricopeptide repeat-containing protein At4g14170-like putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein At1g18485-like pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485-like pentatricopeptide repeat-containing protein At1g18485
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107824841 107771664 101253876 102595447 100780689 25488894 107959278 102623126 4351907 123191001 123055151 123431216 8061060
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