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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4351907   pentatricopeptide repeat-containing protein At5g27110 
 osa-r.6   4351907   pentatricopeptide repeat-containing protein At5g27110 
 osa-m.8   4351907   pentatricopeptide repeat-containing protein At5g27110 
 osa-e.1   4351907   pentatricopeptide repeat-containing protein At5g27110 
 gma-u.5   100780689   putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial 
 sly-u.5   101253876   pentatricopeptide repeat-containing protein At1g18485-like 
 mtr-u.5   25488894   pentatricopeptide repeat-containing protein At3g16610 

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Top 50 coexpressed genes to 4351907 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4351907 (osa-u.5 coexpression data)

CoexMap"4351907"


osaLOC4351907 | Entrez gene ID : 4351907    
Species osa gma sly mtr tae hvu ath zma ghi bdi cit vvi bra cre sbi ppo bna nta sot
Paralog 4 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (252 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5729 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1223 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4590 genes)  IEA  
Protein XP_015618433.1 [sequence] [blastp]
XP_015618434.1 [sequence] [blastp]
XP_015618435.1 [sequence] [blastp]
XP_015618437.1 [sequence] [blastp]
XP_015618438.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for XP_015618433.1)
chlo 9,  nucl 1,  mito 1  (predict for XP_015618434.1)
chlo 9,  nucl 1,  mito 1  (predict for XP_015618435.1)
chlo 9,  nucl 1,  mito 1  (predict for XP_015618437.1)
chlo 9,  nucl 1,  mito 1  (predict for XP_015618438.1)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for XP_015618433.1)
other 6,  mito 4  (predict for XP_015618434.1)
other 6,  mito 4  (predict for XP_015618435.1)
other 6,  mito 4  (predict for XP_015618437.1)
other 6,  mito 4  (predict for XP_015618438.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4351907

.
osa-r.6
for
4351907

.
osa-m.8
for
4351907

.
osa-e.1
for
4351907

.
gma-u.5
for
100780689

.
sly-u.5
for
101253876

.
mtr-u.5
for
25488894

.


Ortholog ID: 12825
Species gma sly osa mtr tae hvu ghi sbi sot cit nta nta
Symbol LOC100780689 LOC101253876 LOC4351907 LOC25488894 LOC123055151 LOC123431216 LOC107959278 LOC8061060 LOC102595447 LOC102623126 LOC107771664 LOC107824841
Function* putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial pentatricopeptide repeat-containing protein At1g18485-like pentatricopeptide repeat-containing protein At5g27110 pentatricopeptide repeat-containing protein At3g16610 pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At1g18485-like pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein At1g18485 pentatricopeptide repeat-containing protein At4g14170-like pentatricopeptide repeat-containing protein At1g18485-like pentatricopeptide repeat-containing protein At5g27110-like putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100780689 101253876 4351907 25488894 123055151 123431216 107959278 8061060 102595447 102623126 107771664 107824841
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