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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107826010   putative pentatricopeptide repeat-containing protein At3g15930 
 vvi-u.5   100258733   pentatricopeptide repeat-containing protein At1g08070, chloroplastic 
 vvi-u.5   100249083   putative pentatricopeptide repeat-containing protein At3g15930 
 osa-u.5   4326221   pentatricopeptide repeat-containing protein At3g62890 
 zma-u.5   103634872   putative pentatricopeptide repeat-containing protein At3g15930 

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Top 50 coexpressed genes to 107826010 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107826010 (nta-r.1 coexpression data)

CoexMap"107826010"


ntaLOC107826010 | Entrez gene ID : 107826010      
Species nta vvi osa zma bdi mtr bra hvu cit gma bna ath ppo sbi sly ghi sot cre tae
Paralog 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2210 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016508431.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  chlo_mito 4,  cyto_mito 3,  chlo 2,  nucl 2  (predict for XP_016508431.2)
Subcellular
localization
TargetP
mito 2  (predict for XP_016508431.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107826010
vvi-u.5
for
100258733
vvi-u.5
for
100249083
osa-u.5
for
4326221
zma-u.5
for
103634872


Ortholog ID: 9481
Species nta sot bra vvi vvi bna cit osa zma tae hvu sbi bdi bdi
Symbol LOC107826010 LOC102590265 LOC103840397 LOC100258733 LOC100249083 LOC106377392 LOC102615537 LOC4326221 LOC103634872 LOC123069051 LOC123443015 LOC8056537 LOC100845066 LOC100846287
Function* putative pentatricopeptide repeat-containing protein At3g15930 putative pentatricopeptide repeat-containing protein At3g15930 putative pentatricopeptide repeat-containing protein At3g15930 pentatricopeptide repeat-containing protein At1g08070, chloroplastic putative pentatricopeptide repeat-containing protein At3g15930 putative pentatricopeptide repeat-containing protein At3g15930 putative pentatricopeptide repeat-containing protein At3g15930 pentatricopeptide repeat-containing protein At3g62890 putative pentatricopeptide repeat-containing protein At3g15930 putative pentatricopeptide repeat-containing protein At3g15930 pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like pentatricopeptide repeat-containing protein At3g62890 putative pentatricopeptide repeat-containing protein At3g15930 putative pentatricopeptide repeat-containing protein At3g15930
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00480 Glutathione metabolism 4
sbi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00480 Glutathione metabolism 2
bdi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107826010 102590265 103840397 100258733 100249083 106377392 102615537 4326221 103634872 123069051 123443015 8056537 100845066 100846287
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