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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107828087   uncharacterized LOC107828087 
 sly-u.5   101245603   uncharacterized LOC101245603 
 sly-u.5   101248411   uncharacterized LOC101248411 
 sly-u.5   101251089   uncharacterized LOC101251089 
 ath-u.5   AT3G01410   Polynucleotidyl transferase, ribonuclease H-like superfamily protein 
 ath-u.5   AT5G51080   RNase H family protein 
 ath-u.5   AT1G24090   RNase H family protein 
 gma-u.5   100779114   uncharacterized LOC100779114 
 gma-u.5   100796237   uncharacterized protein Mb2253c 
 gma-u.5   100809644   uncharacterized LOC100809644 
 vvi-u.5   100255243   uncharacterized LOC100255243 
 vvi-u.5   100242330   uncharacterized LOC100242330 
 ppo-u.5   7471483   uncharacterized LOC7471483 
 ppo-u.5   7472561   uncharacterized LOC7472561 
 ppo-u.5   7462616   uncharacterized LOC7462616 
 osa-u.5   4348807   uncharacterized LOC4348807 
 osa-u.5   9268720   uncharacterized LOC9268720 
 zma-u.5   100274104   putative rnase H family protein 
 zma-u.5   100191864   uncharacterized LOC100191864 
 zma-u.5   100278534   uncharacterized LOC100278534 

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Top 50 coexpressed genes to 107828087 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107828087 (nta-r.1 coexpression data)

CoexMap"107828087"


ntaLOC107828087 | Entrez gene ID : 107828087      
Species nta sly ath gma vvi ppo osa zma tae mtr hvu ghi bdi cit bra sbi bna cre sot
Paralog 1 3 3 3 2 3 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0004523 [list] [network] RNA-DNA hybrid ribonuclease activity  (926 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (9393 genes)  IEA  
Protein XP_016510819.1 [sequence] [blastp]
XP_016510821.1 [sequence] [blastp]
XP_016510822.1 [sequence] [blastp]
XP_016510823.1 [sequence] [blastp]
XP_016510824.1 [sequence] [blastp]
XP_016510825.1 [sequence] [blastp]
XP_016510826.1 [sequence] [blastp]
XP_075105748.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_016510819.1)
cyto 6,  chlo 2,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_016510821.1)
cyto 6,  chlo 2,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_016510822.1)
cyto 6,  chlo 2,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_016510823.1)
cyto 6,  chlo 2,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_016510824.1)
cyto 6,  chlo 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for XP_016510825.1)
cyto 6,  chlo 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for XP_016510826.1)
cyto 6,  chlo 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for XP_075105748.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016510819.1)
other 8  (predict for XP_016510821.1)
other 8  (predict for XP_016510822.1)
other 8  (predict for XP_016510823.1)
other 8  (predict for XP_016510824.1)
other 8  (predict for XP_016510825.1)
other 8  (predict for XP_016510826.1)
other 8  (predict for XP_075105748.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107828087

.
sly-u.5
for
101245603

.
sly-u.5
for
101248411

.
sly-u.5
for
101251089

.
ath-u.5
for
AT3G01410

.
ath-u.5
for
AT5G51080

.
ath-u.5
for
AT1G24090

.
gma-u.5
for
100779114

.
gma-u.5
for
100796237

.
gma-u.5
for
100809644

.
vvi-u.5
for
100255243

.
vvi-u.5
for
100242330

.
ppo-u.5
for
7471483

.
ppo-u.5
for
7472561

.
ppo-u.5
for
7462616

.
osa-u.5
for
4348807

.
osa-u.5
for
9268720

.
zma-u.5
for
100274104

.
zma-u.5
for
100191864

.
zma-u.5
for
100278534

.


Ortholog ID: 1315
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo tae tae hvu hvu ghi ghi bna bna cre sbi sot sot cit cit bdi bdi nta nta
Symbol AT3G01410 AT1G24090 LOC100796237 LOC100779114 LOC101251089 LOC101055521 LOC4348807 LOC9268720 LOC100278534 LOC100191864 LOC103850071 LOC103858522 LOC100255243 LOC100242330 LOC7471483 LOC7472561 LOC123119697 LOC123166302 LOC123398451 LOC123430249 LOC107922695 LOC107886670 LOC106367589 LOC106433426 CHLRE_06g272550v5 LOC8054818 LOC102582559 LOC102591820 LOC102607166 LOC102614852 LOC100841248 LOC100831320 LOC107789608 LOC107793196
Function* Polynucleotidyl transferase, ribonuclease H-like superfamily protein RNase H family protein uncharacterized protein Mb2253c uncharacterized LOC100779114 uncharacterized LOC101251089 Hop-interacting protein THI034 uncharacterized LOC4348807 uncharacterized LOC9268720 uncharacterized LOC100278534 uncharacterized LOC100191864 uncharacterized LOC103850071 uncharacterized protein Mb2253c-like uncharacterized LOC100255243 uncharacterized LOC100242330 uncharacterized LOC7471483 uncharacterized LOC7472561 uncharacterized LOC123119697 uncharacterized LOC123166302 uncharacterized LOC123398451 uncharacterized LOC123430249 uncharacterized LOC107922695 uncharacterized LOC107886670 uncharacterized LOC106367589 uncharacterized LOC106433426 uncharacterized protein uncharacterized LOC8054818 uncharacterized protein YpeP uncharacterized LOC102591820 uncharacterized LOC102607166 uncharacterized LOC102614852 uncharacterized LOC100841248 uncharacterized LOC100831320 uncharacterized LOC107789608 uncharacterized LOC107793196
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 2
ath03013 Nucleocytoplasmic transport 2
ath04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00270 Cysteine and methionine metabolism 2
ghi00330 Arginine and proline metabolism 2
ghi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 3
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi01230 Biosynthesis of amino acids 2
sbi00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00230 Purine metabolism 2
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03420 Nucleotide excision repair 3
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 3
nta03460 Fanconi anemia pathway 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821319 839020 100796237 100779114 101251089 101055521 4348807 9268720 100278534 100191864 103850071 103858522 100255243 100242330 7471483 7472561 123119697 123166302 123398451 123430249 107922695 107886670 106367589 106433426 66053656 8054818 102582559 102591820 102607166 102614852 100841248 100831320 107789608 107793196
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