ATTED-II : GeneCoexpression result

Species	Gene	Description
nta-r.1	107828723	beclin-1-like protein
nta-r.1	107784737	beclin-1-like protein
sly-u.5	atg6	beclin 1 protein
sot-r.1	102603263	beclin-1-like protein-like
ath-u.5	ATG6	AUTOPHAGY 6
gma-u.5	100812721	beclin-1-like protein
gma-u.5	ATG6	beclin 1 protein
bra-r.6	103830319	beclin-1-like protein
vvi-u.5	100232897	beclin-1-like protein
ppo-u.5	7457395	beclin-1-like protein
mtr-u.5	11414676	beclin-1-like protein
ghi-r.1	107938159	beclin-1-like protein
ghi-r.1	107900947	beclin-1-like protein
bna-r.1	106353284	beclin-1-like protein
bna-r.1	106433932	beclin-1-like protein
bna-r.1	125588660	beclin-1-like protein
cit-r.1	102619358	beclin-1-like protein
cit-r.1	127901019	beclin-1-like protein
osa-u.5	9271973	beclin-1-like protein
osa-u.5	4333557	beclin-1-like protein
osa-u.5	4324394	beclin-1-like protein
zma-u.5	732797	beclin 1 protein
zma-u.5	103636340	beclin-1-like protein
tae-r.2	123061865	beclin-1-like protein
tae-r.2	543059	beclin-1-like protein
tae-r.2	123070560	beclin-1-like protein
hvu-r.1	123444118	beclin-1-like protein
sbi-r.1	8068024	beclin-1-like protein
sbi-r.1	8079821	beclin-1-like protein
bdi-r.1	100840314	beclin-1-like protein
cre-r.1	CHLRE_01g020264v5	uncharacterized protein

Annotation

functional annotation

KEGG

nta04136 [list] [network] Autophagy - other (80 genes)

GO BP

GO:0006995 [list] [network] cellular response to nitrogen starvation	(7 genes)	IEA
GO:0000423 [list] [network] mitophagy	(12 genes)	IEA
GO:0000045 [list] [network] autophagosome assembly	(57 genes)	IEA
GO:0045324 [list] [network] late endosome to vacuole transport	(62 genes)	IEA

GO CC

GO:0034271 [list] [network] phosphatidylinositol 3-kinase complex, class III, type I	(6 genes)	IEA
GO:0034272 [list] [network] phosphatidylinositol 3-kinase complex, class III, type II	(6 genes)	IEA
GO:0000407 [list] [network] phagophore assembly site	(30 genes)	IEA

GO MF

GO:0043548 [list] [network] phosphatidylinositol 3-kinase binding	(2 genes)	IEA
GO:0030674 [list] [network] protein-macromolecule adaptor activity	(394 genes)	IEA

Protein

NP_001313137.1 [sequence] [blastp]
XP_016511572.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, chlo 3, E.R. 1, chlo_mito 1	(predict for NP_001313137.1)
chlo 7, pero 1, cyto 1, extr 1	(predict for XP_016511572.1)

Subcellular
localization
TargetP

other 6	(predict for NP_001313137.1)
chlo 6, other 4	(predict for XP_016511572.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107828723	nta-r.1 for 107784737	sly-u.5 for atg6	sot-r.1 for 102603263	ath-u.5 for ATG6	gma-u.5 for 100812721	gma-u.5 for ATG6	bra-r.6 for 103830319	vvi-u.5 for 100232897	ppo-u.5 for 7457395	mtr-u.5 for 11414676	ghi-r.1 for 107938159	ghi-r.1 for 107900947	bna-r.1 for 106353284	bna-r.1 for 106433932	bna-r.1 for 125588660	cit-r.1 for 102619358	cit-r.1 for 127901019	osa-u.5 for 9271973	osa-u.5 for 4333557	osa-u.5 for 4324394	zma-u.5 for 732797	zma-u.5 for 103636340	tae-r.2 for 123061865	tae-r.2 for 543059	tae-r.2 for 123070560	hvu-r.1 for 123444118	sbi-r.1 for 8068024	sbi-r.1 for 8079821	bdi-r.1 for 100840314	cre-r.1 for CHLRE_01g020264v5

Ortholog

Ortholog ID: 6912

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

atg6

ATG6

ATG6

Function^*

beclin-1-like protein

beclin 1 protein

beclin-1-like protein-like

AUTOPHAGY 6

beclin-1-like protein

beclin 1 protein

beclin-1-like protein

beclin 1 protein

beclin-1-like protein

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	4
nta04075	Plant hormone signal transduction	4
nta04626	Plant-pathogen interaction	4
nta04136	Autophagy - other	2
nta03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	4
nta04075	Plant hormone signal transduction	4
nta04626	Plant-pathogen interaction	4
nta04136	Autophagy - other	3
nta04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04136	Autophagy - other	6
gma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04136	Autophagy - other	4
bra00564	Glycerophospholipid metabolism	2
bra00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03420	Nucleotide excision repair	5
ghi04120	Ubiquitin mediated proteolysis	4
ghi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	2
ghi03420	Nucleotide excision repair	2
ghi00510	N-Glycan biosynthesis	2
ghi00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04136	Autophagy - other	4
hvu04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04136	Autophagy - other	5

Expression

Expression pattern

Entrez Gene ID^*

107828723

107784737

778283

102603263

825344

100812721

732646

103830319

100232897

7457395

11414676

107938159

107900947

106353284

106433932

125588660

102619358

127901019

9271973

4333557

4324394

732797

103636340

123061865

543059

123070560

123444118

8068024

8079821

100840314

5715190

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107828723 (nta-r.1 coexpression data)

Top 50 enrichment test to 107828723 (nta-r.1 coexpression data)


Species	nta	sly	sot	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	1	1	2	1	1	1	1	2	3	2	3	2	3	1	2	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107828723 (nta-r.1 coexpression data)

Top 50 enrichment test to 107828723 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**