Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   ATG6   beclin 1 protein 
 gma-r.7   ATG6   beclin 1 protein 
 gma-m.5   ATG6   beclin 1 protein 
 gma-u.5   100812721   beclin-1-like protein 
 mtr-u.5   11414676   beclin-1-like protein 
 ppo-u.5   7457395   beclin-1-like protein 
 ath-u.5   ATG6   AUTOPHAGY 6 
 vvi-u.5   100232897   beclin-1-like protein 
 sly-u.5   atg6   beclin 1 protein 
 osa-u.5   4324394   beclin-1-like protein 
 osa-u.5   4333557   beclin-1-like protein 
 osa-u.5   9271973   beclin-1-like protein 
 zma-u.5   732797   beclin 1 protein 
 zma-u.5   103636340   beclin-1-like protein 

close


Top 50 coexpressed genes to ATG6 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to ATG6 (gma-u.5 coexpression data)

CoexMap"732646"


gmaATG6 | Entrez gene ID : 732646      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 1 1 1 3 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx04136 [list] [network] Autophagy - other (68 genes)
GO BP
GO:0006995 [list] [network] cellular response to nitrogen starvation  (18 genes)  IEA  
GO:0000045 [list] [network] autophagosome assembly  (52 genes)  IEA  
GO:0045324 [list] [network] late endosome to vacuole transport  (68 genes)  IEA  
GO:0006914 [list] [network] autophagy  (99 genes)  IEA  
GO CC
GO:0034271 [list] [network] phosphatidylinositol 3-kinase complex, class III, type I  (6 genes)  IEA  
GO:0034272 [list] [network] phosphatidylinositol 3-kinase complex, class III, type II  (6 genes)  IEA  
GO:0000407 [list] [network] phagophore assembly site  (40 genes)  IEA  
GO MF
Protein NP_001238340.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_001238340.2)
Subcellular
localization
TargetP
other 7  (predict for NP_001238340.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
ATG6

.
gma-r.7
for
ATG6

.
gma-m.5
for
ATG6

.
gma-u.5
for
100812721

.
mtr-u.5
for
11414676

.
ppo-u.5
for
7457395

.
ath-u.5
for
ATG6

.
vvi-u.5
for
100232897

.
sly-u.5
for
atg6

.
osa-u.5
for
4324394

.
osa-u.5
for
4333557

.
osa-u.5
for
9271973

.
zma-u.5
for
732797

.
zma-u.5
for
103636340

.


Ortholog ID: 6912
Species ath gma gma sly osa osa zma zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot cit cit bdi nta nta
Symbol ATG6 LOC100812721 ATG6 atg6 LOC4324394 LOC9271973 LOC103636340 LOC732797 LOC103830319 LOC100232897 LOC7457395 LOC11414676 LOC543059 LOC123070560 LOC123444118 LOC107900947 LOC107938159 LOC106353284 LOC106433932 CHLRE_01g020264v5 LOC8068024 LOC8079821 LOC102603263 LOC127901019 LOC102619358 LOC100840314 LOC107784737 LOC107828723
Function* AUTOPHAGY 6 beclin-1-like protein beclin 1 protein beclin 1 protein beclin-1-like protein beclin-1-like protein beclin-1-like protein beclin 1 protein beclin-1-like protein beclin-1-like protein beclin-1-like protein beclin-1-like protein beclin-1-like protein beclin-1-like protein beclin-1-like protein beclin-1-like protein beclin-1-like protein beclin-1-like protein beclin-1-like protein uncharacterized protein beclin-1-like protein beclin-1-like protein beclin-1-like protein-like beclin-1-like protein beclin-1-like protein beclin-1-like protein beclin-1-like protein beclin-1-like protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 6
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 4
bra00564 Glycerophospholipid metabolism 2
bra00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 4
hvu04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
ghi03420 Nucleotide excision repair 2
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 5
ghi04120 Ubiquitin mediated proteolysis 4
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04136 Autophagy - other 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 4
nta04075 Plant hormone signal transduction 4
nta04626 Plant-pathogen interaction 4
nta04136 Autophagy - other 3
nta04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 4
nta04075 Plant hormone signal transduction 4
nta04626 Plant-pathogen interaction 4
nta04136 Autophagy - other 2
nta03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825344 100812721 732646 778283 4324394 9271973 103636340 732797 103830319 100232897 7457395 11414676 543059 123070560 123444118 107900947 107938159 106353284 106433932 5715190 8068024 8079821 102603263 127901019 102619358 100840314 107784737 107828723
The preparation time of this page was 0.1 [sec].