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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107828948   pentatricopeptide repeat-containing protein At3g51320-like 
 sly-u.5   101261984   pentatricopeptide repeat-containing protein At3g51320 
 ath-u.5   AT3G51320   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100803907   pentatricopeptide repeat-containing protein At3g51320 
 ppo-u.5   18099150   pentatricopeptide repeat-containing protein At3g51320 
 mtr-u.5   11434457   pentatricopeptide repeat-containing protein At3g51320 
 zma-u.5   100193985   uncharacterized LOC100193985 
 zma-u.5   100501345   pentatricopeptide repeat-containing protein At3g51320 

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Top 50 coexpressed genes to 107828948 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107828948 (nta-r.1 coexpression data)

CoexMap"107828948"


ntaLOC107828948 | Entrez gene ID : 107828948      
Species nta sly ath gma ppo mtr zma hvu vvi bna cit bra ghi osa sbi bdi tae cre sot
Paralog 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016511833.2 [sequence] [blastp]
XP_016511835.2 [sequence] [blastp]
XP_075080708.1 [sequence] [blastp]
XP_075080709.1 [sequence] [blastp]
XP_075080710.1 [sequence] [blastp]
XP_075080711.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  cyto_mito 1,  extr 1,  E.R. 1  (predict for XP_016511833.2)
chlo 7,  mito 1,  cyto_mito 1,  extr 1,  E.R. 1  (predict for XP_016511835.2)
chlo 7,  mito 1,  cyto_mito 1,  extr 1,  E.R. 1  (predict for XP_075080708.1)
chlo 7,  mito 1,  cyto_mito 1,  extr 1,  E.R. 1  (predict for XP_075080709.1)
chlo 7,  mito 1,  cyto_mito 1,  extr 1,  E.R. 1  (predict for XP_075080710.1)
chlo 7,  mito 1,  cyto_mito 1,  extr 1,  E.R. 1  (predict for XP_075080711.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_016511833.2)
chlo 4  (predict for XP_016511835.2)
chlo 4  (predict for XP_075080708.1)
chlo 4  (predict for XP_075080709.1)
chlo 4  (predict for XP_075080710.1)
chlo 4  (predict for XP_075080711.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107828948
sly-u.5
for
101261984
ath-u.5
for
AT3G51320
gma-u.5
for
100803907
ppo-u.5
for
18099150
mtr-u.5
for
11434457
zma-u.5
for
100193985
zma-u.5
for
100501345


Ortholog ID: 10142
Species nta nta sly sot ath gma bra ppo mtr ghi ghi bna bna cit zma zma tae hvu sbi
Symbol LOC107761976 LOC107828948 LOC101261984 LOC102589136 AT3G51320 LOC100803907 LOC103841053 LOC18099150 LOC11434457 LOC107943499 LOC107909474 LOC111208846 LOC106367731 LOC107178806 LOC100501345 LOC100193985 LOC123179884 LOC123404021 LOC8076497
Function* pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320-like pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320-like Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320-like pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320 uncharacterized LOC100193985 pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107761976 107828948 101261984 102589136 824295 100803907 103841053 18099150 11434457 107943499 107909474 111208846 106367731 107178806 100501345 100193985 123179884 123404021 8076497
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