Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8076497   pentatricopeptide repeat-containing protein At3g51320 
 zma-u.5   100193985   uncharacterized LOC100193985 
 zma-u.5   100501345   pentatricopeptide repeat-containing protein At3g51320 
 ath-u.5   AT3G51320   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100803907   pentatricopeptide repeat-containing protein At3g51320 
 sly-u.5   101261984   pentatricopeptide repeat-containing protein At3g51320 
 ppo-u.5   18099150   pentatricopeptide repeat-containing protein At3g51320 
 mtr-u.5   11434457   pentatricopeptide repeat-containing protein At3g51320 

close


Top 50 coexpressed genes to 8076497 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 8076497 (sbi-r.1 coexpression data)

CoexMap"8076497"


sbiLOC8076497 | Entrez gene ID : 8076497      
Species sbi zma ath gma sly ppo mtr bra nta osa cre cit vvi hvu bdi sot tae bna ghi
Paralog 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002448801.1 [sequence] [blastp]
XP_021318134.1 [sequence] [blastp]
XP_021318135.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 4,  cyto 3,  E.R. 2,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_002448801.1)
extr 4,  cyto 3,  E.R. 2,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_021318134.1)
extr 4,  cyto 3,  E.R. 2,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_021318135.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002448801.1)
other 9  (predict for XP_021318134.1)
other 9  (predict for XP_021318135.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8076497

.
zma-u.5
for
100193985

.
zma-u.5
for
100501345

.
ath-u.5
for
AT3G51320

.
gma-u.5
for
100803907

.
sly-u.5
for
101261984

.
ppo-u.5
for
18099150

.
mtr-u.5
for
11434457

.


Ortholog ID: 10142
Species ath gma sly zma zma bra ppo mtr tae hvu ghi ghi bna bna sbi sot cit nta nta
Symbol AT3G51320 LOC100803907 LOC101261984 LOC100501345 LOC100193985 LOC103841053 LOC18099150 LOC11434457 LOC123179884 LOC123404021 LOC107943499 LOC107909474 LOC111208846 LOC106367731 LOC8076497 LOC102589136 LOC107178806 LOC107761976 LOC107828948
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320 uncharacterized LOC100193985 pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320-like pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320-like pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320 pentatricopeptide repeat-containing protein At3g51320-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824295 100803907 101261984 100501345 100193985 103841053 18099150 11434457 123179884 123404021 107943499 107909474 111208846 106367731 8076497 102589136 107178806 107761976 107828948
The preparation time of this page was 0.1 [sec].