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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107828998   uncharacterized LOC107828998 
 sly-u.5   101245385   pentatricopeptide repeat-containing protein 
 ath-u.5   AT5G42310   Pentatricopeptide repeat (PPR-like) superfamily protein 
 gma-u.5   100808427   pentatricopeptide repeat-containing protein At5g42310, chloroplastic 
 gma-u.5   100778551   pentatricopeptide repeat-containing protein At5g42310, chloroplastic 
 vvi-u.5   100263329   pentatricopeptide repeat-containing protein At5g42310, chloroplastic 
 ppo-u.5   7496866   pentatricopeptide repeat-containing protein At5g42310, chloroplastic 
 ppo-u.5   7494690   pentatricopeptide repeat-containing protein At5g42310, chloroplastic 
 mtr-u.5   25490300   pentatricopeptide repeat-containing protein At5g42310, chloroplastic 
 osa-u.5   4343532   pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic-like 
 zma-u.5   732792   chloroplast RNA processing 1 

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Top 50 coexpressed genes to 107828998 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107828998 (nta-r.1 coexpression data)

CoexMap"107828998"


ntaLOC107828998 | Entrez gene ID : 107828998    
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 1 1 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016511893.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 5,  cyto_mito 1,  mito 1  (predict for XP_016511893.1)
Subcellular
localization
TargetP
mito 8,  chlo 4  (predict for XP_016511893.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107828998
sly-u.5
for
101245385
ath-u.5
for
AT5G42310
gma-u.5
for
100808427
gma-u.5
for
100778551
vvi-u.5
for
100263329
ppo-u.5
for
7496866
ppo-u.5
for
7494690
mtr-u.5
for
25490300
osa-u.5
for
4343532
zma-u.5
for
732792


Ortholog ID: 9713
Species nta nta sly sot ath gma gma bra vvi ppo ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi
Symbol LOC107828998 LOC107789009 LOC101245385 LOC102595862 AT5G42310 LOC100778551 LOC100808427 LOC103862617 LOC100263329 LOC7494690 LOC7496866 LOC25490300 LOC107901451 LOC107904012 LOC106441265 LOC125585306 LOC102610977 LOC4343532 LOC732792 LOC123188356 LOC123044597 LOC123425777 LOC8081724 LOC100821581
Function* uncharacterized LOC107828998 uncharacterized LOC107789009 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g42310, mitochondrial Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At5g42310, chloroplastic pentatricopeptide repeat-containing protein At5g42310, chloroplastic pentatricopeptide repeat-containing protein At5g42310, chloroplastic pentatricopeptide repeat-containing protein At5g42310, chloroplastic pentatricopeptide repeat-containing protein At5g42310, chloroplastic pentatricopeptide repeat-containing protein At5g42310, chloroplastic pentatricopeptide repeat-containing protein At5g42310, chloroplastic pentatricopeptide repeat-containing protein At5g42310, chloroplastic pentatricopeptide repeat-containing protein At5g42310, chloroplastic pentatricopeptide repeat-containing protein At5g42310, chloroplastic pentatricopeptide repeat-containing protein At5g42310, chloroplastic-like pentatricopeptide repeat-containing protein At5g42310, chloroplastic pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic-like chloroplast RNA processing 1 pentatricopeptide repeat-containing protein CRP1, chloroplastic pentatricopeptide repeat-containing protein CRP1, chloroplastic pentatricopeptide repeat-containing protein CRP1, chloroplastic pentatricopeptide repeat-containing protein At5g42310, mitochondrial pentatricopeptide repeat-containing protein CRP1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 2
sbi00941 Flavonoid biosynthesis 2
sbi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107828998 107789009 101245385 102595862 834236 100778551 100808427 103862617 100263329 7494690 7496866 25490300 107901451 107904012 106441265 125585306 102610977 4343532 732792 123188356 123044597 123425777 8081724 100821581
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