ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107886003	uncharacterized LOC107886003
ghi-r.1	107950583	uncharacterized LOC107950583
ghi-r.1	107924898	uncharacterized LOC107924898
ath-u.5	AT4G05400	copper ion binding protein
ath-u.5	AT4G21140	copper ion-binding protein
bra-r.6	103858741	uncharacterized LOC103858741
bra-r.6	103839747	uncharacterized LOC103839747
bna-r.1	106402432	uncharacterized LOC106402432
bna-r.1	106369020	uncharacterized LOC106369020
bna-r.1	106374350	uncharacterized LOC106374350
cit-r.1	102631107	hypothetical protein
gma-u.5	100778582	uncharacterized LOC100778582
gma-u.5	100776061	uncharacterized LOC100776061
vvi-u.5	100258561	uncharacterized LOC100258561
ppo-u.5	7471901	uncharacterized LOC7471901
mtr-u.5	25500592	uncharacterized LOC25500592
mtr-u.5	112417226	uncharacterized LOC112417226
sly-u.5	101248615	uncharacterized LOC101248615
sot-r.1	102596043	uncharacterized LOC102596043
nta-r.1	107820362	uncharacterized LOC107820362
nta-r.1	107808434	uncharacterized LOC107808434
osa-u.5	4324030	uncharacterized LOC4324030
zma-u.5	100272832	uncharacterized LOC100272832
tae-r.2	123087715	uncharacterized LOC123087715
tae-r.2	123088215	uncharacterized LOC123088215
tae-r.2	123099170	uncharacterized LOC123099170
hvu-r.1	123394990	uncharacterized LOC123394990
sbi-r.1	8066521	uncharacterized LOC8066521
bdi-r.1	100836882	uncharacterized LOC100836882
cre-r.1	CHLRE_10g428350v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005762 [list] [network] mitochondrial large ribosomal subunit	(54 genes)	IEA
GO:0005761 [list] [network] mitochondrial ribosome	(76 genes)	IEA

GO MF

Protein

XP_016665279.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9

(predict for XP_016665279.1)

Subcellular
localization
TargetP

mito 5, other 3

(predict for XP_016665279.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107886003	ghi-r.1 for 107950583	ghi-r.1 for 107924898	ath-u.5 for AT4G05400	ath-u.5 for AT4G21140	bra-r.6 for 103858741	bra-r.6 for 103839747	bna-r.1 for 106402432	bna-r.1 for 106369020	bna-r.1 for 106374350	cit-r.1 for 102631107	gma-u.5 for 100778582	gma-u.5 for 100776061	vvi-u.5 for 100258561	ppo-u.5 for 7471901	mtr-u.5 for 25500592	mtr-u.5 for 112417226	sly-u.5 for 101248615	sot-r.1 for 102596043	nta-r.1 for 107820362	nta-r.1 for 107808434	osa-u.5 for 4324030	zma-u.5 for 100272832	tae-r.2 for 123087715	tae-r.2 for 123088215	tae-r.2 for 123099170	hvu-r.1 for 123394990	sbi-r.1 for 8066521	bdi-r.1 for 100836882	cre-r.1 for CHLRE_10g428350v5

Ortholog

Ortholog ID: 6598

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC107886003

uncharacterized LOC107950583

uncharacterized LOC107924898

copper ion binding protein

copper ion-binding protein

uncharacterized LOC103858741

uncharacterized LOC103839747

uncharacterized LOC106402432

uncharacterized LOC106374350

uncharacterized LOC106438404

hypothetical protein

uncharacterized LOC100778582

uncharacterized LOC100776061

uncharacterized LOC100258561

uncharacterized LOC7471901

uncharacterized LOC25500592

uncharacterized LOC112417226

uncharacterized LOC101248615

uncharacterized LOC102596043

uncharacterized LOC107820362

uncharacterized LOC107808434

uncharacterized LOC4324030

uncharacterized LOC100272832

uncharacterized LOC123088215

uncharacterized LOC123099170

uncharacterized LOC123123718

uncharacterized LOC123394990

uncharacterized LOC8066521

uncharacterized LOC100836882

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	5
ghi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	4
ghi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2
ghi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	2
ath03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2
gma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00970	Aminoacyl-tRNA biosynthesis	4
vvi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03015	mRNA surveillance pathway	2
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03022	Basal transcription factors	3
mtr03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	3
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	3
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	4
zma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	11
tae03013	Nucleocytoplasmic transport	4
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	5
tae03013	Nucleocytoplasmic transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	7
bdi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	7

Expression

Expression pattern

Entrez Gene ID^*

107886003

107950583

107924898

825888

827862

103858741

103839747

106402432

106374350

106438404

102631107

100778582

100776061

100258561

7471901

25500592

112417226

101248615

102596043

107820362

107808434

4324030

100272832

123088215

123099170

123123718

123394990

8066521

100836882

5728142

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107886003 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107886003 (ghi-r.1 coexpression data)


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	2	3	1	2	1	1	2	1	1	2	1	1	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107886003 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107886003 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**