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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7471901   uncharacterized LOC7471901 
 ppo-r.4   7471901   uncharacterized LOC7471901 
 ppo-m.4   7471901   uncharacterized LOC7471901 
 gma-u.5   100778582   uncharacterized LOC100778582 
 gma-u.5   100776061   uncharacterized LOC100776061 
 mtr-u.5   112417226   uncharacterized LOC112417226 
 mtr-u.5   25500592   uncharacterized LOC25500592 
 ath-u.5   AT4G05400   copper ion binding protein 
 ath-u.5   AT4G21140   copper ion-binding protein 
 vvi-u.5   100258561   uncharacterized LOC100258561 
 sly-u.5   101248615   uncharacterized LOC101248615 
 osa-u.5   4324030   uncharacterized LOC4324030 
 zma-u.5   100272832   uncharacterized LOC100272832 

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Top 50 coexpressed genes to 7471901 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7471901 (ppo-u.5 coexpression data)

CoexMap"7471901"


ppoLOC7471901 | Entrez gene ID : 7471901    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (24 genes)  IEA  
GO:0005761 [list] [network] mitochondrial ribosome  (33 genes)  IEA  
GO MF
Protein XP_002317373.1 [sequence] [blastp]
XP_024467302.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_002317373.1)
chlo 10  (predict for XP_024467302.1)
Subcellular
localization
TargetP
mito 7,  chlo 3  (predict for XP_002317373.1)
mito 7,  chlo 3  (predict for XP_024467302.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7471901

.
ppo-r.4
for
7471901

.
ppo-m.4
for
7471901

.
gma-u.5
for
100778582

.
gma-u.5
for
100776061

.
mtr-u.5
for
112417226

.
mtr-u.5
for
25500592

.
ath-u.5
for
AT4G05400

.
ath-u.5
for
AT4G21140

.
vvi-u.5
for
100258561

.
sly-u.5
for
101248615

.
osa-u.5
for
4324030

.
zma-u.5
for
100272832

.


Ortholog ID: 6598
Species ath ath gma gma sly osa zma bra bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT4G05400 AT4G21140 LOC100778582 LOC100776061 LOC101248615 LOC4324030 LOC100272832 LOC103839747 LOC103858741 LOC100258561 LOC7471901 LOC25500592 LOC112417226 LOC123123718 LOC123099170 LOC123394990 LOC107924898 LOC107886003 LOC106438404 LOC106402432 CHLRE_10g428350v5 LOC8066521 LOC102596043 LOC102631107 LOC100836882 LOC107820362 LOC107808434
Function* copper ion binding protein copper ion-binding protein uncharacterized LOC100778582 uncharacterized LOC100776061 uncharacterized LOC101248615 uncharacterized LOC4324030 uncharacterized LOC100272832 uncharacterized LOC103839747 uncharacterized LOC103858741 uncharacterized LOC100258561 uncharacterized LOC7471901 uncharacterized LOC25500592 uncharacterized LOC112417226 uncharacterized LOC123123718 uncharacterized LOC123099170 uncharacterized LOC123394990 uncharacterized LOC107924898 uncharacterized LOC107886003 uncharacterized LOC106438404 uncharacterized LOC106402432 uncharacterized protein uncharacterized LOC8066521 uncharacterized LOC102596043 hypothetical protein uncharacterized LOC100836882 uncharacterized LOC107820362 uncharacterized LOC107808434
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 4
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03022 Basal transcription factors 3
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 7
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825888 827862 100778582 100776061 101248615 4324030 100272832 103839747 103858741 100258561 7471901 25500592 112417226 123123718 123099170 123394990 107924898 107886003 106438404 106402432 5728142 8066521 102596043 102631107 100836882 107820362 107808434
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