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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107886412   DNA repair endonuclease UVH1 
 ghi-r.1   107919892   DNA repair endonuclease UVH1 
 ath-u.5   UVH1   Restriction endonuclease, type II-like superfamily protein 
 bra-r.6   103864059   DNA repair endonuclease UVH1 
 bna-r.1   106435272   DNA repair endonuclease UVH1 
 bna-r.1   106446208   DNA repair endonuclease UVH1-like 
 cit-r.1   102624221   DNA repair endonuclease UVH1 
 gma-u.5   100812359   DNA repair endonuclease UVH1 
 vvi-u.5   100247853   DNA repair endonuclease UVH1 
 ppo-u.5   18094546   DNA repair endonuclease UVH1 
 mtr-u.5   11442992   DNA repair endonuclease UVH1 
 sly-u.5   101249845   DNA repair endonuclease UVH1 
 sot-r.1   102590040   DNA repair endonuclease UVH1 
 nta-r.1   107787518   DNA repair endonuclease UVH1-like 
 nta-r.1   107810733   DNA repair endonuclease UVH1 
 osa-u.5   4331279   DNA repair endonuclease UVH1 
 zma-u.5   100192883   RAD1 DNA repair protein homolog 
 tae-r.2   123093980   DNA repair endonuclease UVH1 
 tae-r.2   123099175   DNA repair endonuclease UVH1 
 hvu-r.1   123450086   DNA repair endonuclease UVH1 
 sbi-r.1   8059542   DNA repair endonuclease UVH1 
 bdi-r.1   100820951   DNA repair endonuclease UVH1 
 cre-r.1   CHLRE_06g311400v5   uncharacterized protein 

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Top 50 coexpressed genes to 107886412 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107886412 (ghi-r.1 coexpression data)

CoexMap"107886412"


ghiLOC107886412 | Entrez gene ID : 107886412    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 1 1 1 1 1 1 2 1 1 2 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03420 [list] [network] Nucleotide excision repair (188 genes)
ghi03460 [list] [network] Fanconi anemia pathway (91 genes)
GO BP
GO:1901255 [list] [network] nucleotide-excision repair involved in interstrand cross-link repair  (2 genes)  IEA  
GO:0000712 [list] [network] resolution of meiotic recombination intermediates  (17 genes)  IEA  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (150 genes)  IEA  
GO CC
GO:0000110 [list] [network] nucleotide-excision repair factor 1 complex  (4 genes)  IEA  
GO MF
GO:0000014 [list] [network] single-stranded DNA endodeoxyribonuclease activity  (5 genes)  IEA  
GO:0003684 [list] [network] damaged DNA binding  (72 genes)  IEA  
GO:0003697 [list] [network] single-stranded DNA binding  (129 genes)  IEA  
Protein XP_016665853.2 [sequence] [blastp]
XP_040954483.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 2,  chlo 1,  plas 1  (predict for XP_016665853.2)
nucl 4,  cyto 2,  chlo 1,  plas 1  (predict for XP_040954483.1)
Subcellular
localization
TargetP
other 5  (predict for XP_016665853.2)
other 5  (predict for XP_040954483.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107886412
ghi-r.1
for
107919892
ath-u.5
for
UVH1
bra-r.6
for
103864059
bna-r.1
for
106435272
bna-r.1
for
106446208
cit-r.1
for
102624221
gma-u.5
for
100812359
vvi-u.5
for
100247853
ppo-u.5
for
18094546
mtr-u.5
for
11442992
sly-u.5
for
101249845
sot-r.1
for
102590040
nta-r.1
for
107787518
nta-r.1
for
107810733
osa-u.5
for
4331279
zma-u.5
for
100192883
tae-r.2
for
123093980
tae-r.2
for
123099175
hvu-r.1
for
123450086
sbi-r.1
for
8059542
bdi-r.1
for
100820951
cre-r.1
for
CHLRE_06g311400v5


Ortholog ID: 11431
Species ghi ghi ath bra bna bna cit gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC107886412 LOC107919892 UVH1 LOC103864059 LOC106435272 LOC106446208 LOC102624221 LOC100812359 LOC100247853 LOC18094546 LOC11442992 LOC101249845 LOC102590040 LOC107787518 LOC107810733 LOC4331279 LOC100192883 LOC123093980 LOC123099175 LOC123450086 LOC8059542 LOC100820951 CHLRE_06g311400v5
Function* DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 Restriction endonuclease, type II-like superfamily protein DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1-like DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1-like DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 RAD1 DNA repair protein homolog DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 5
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03420 Nucleotide excision repair 2
ath04142 Lysosome 2
ath03083 Polycomb repressive complex 2
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 7
bna03420 Nucleotide excision repair 6
bna03460 Fanconi anemia pathway 4
bna04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 7
bna03420 Nucleotide excision repair 6
bna03460 Fanconi anemia pathway 4
bna04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03013 Nucleocytoplasmic transport 3
ppo03022 Basal transcription factors 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03420 Nucleotide excision repair 2
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
nta03420 Nucleotide excision repair 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03420 Nucleotide excision repair 3
zma03040 Spliceosome 2
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 3
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107886412 107919892 834117 103864059 106435272 106446208 102624221 100812359 100247853 18094546 11442992 101249845 102590040 107787518 107810733 4331279 100192883 123093980 123099175 123450086 8059542 100820951 5716786
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