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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_06g311400v5   uncharacterized protein 
 ath-u.5   UVH1   Restriction endonuclease, type II-like superfamily protein 
 gma-u.5   100812359   DNA repair endonuclease UVH1 
 sly-u.5   101249845   DNA repair endonuclease UVH1 
 osa-u.5   4331279   DNA repair endonuclease UVH1 
 zma-u.5   100192883   RAD1 DNA repair protein homolog 
 vvi-u.5   100247853   DNA repair endonuclease UVH1 
 ppo-u.5   18094546   DNA repair endonuclease UVH1 
 mtr-u.5   11442992   DNA repair endonuclease UVH1 

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Top 50 coexpressed genes to CHLRE_06g311400v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_06g311400v5 (cre-r.1 coexpression data)

CoexMap"5716786"


creCHLRE_06g311400v5 | Entrez gene ID : 5716786    
Species cre ath gma sly osa zma vvi ppo mtr sbi nta bra hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre03420 [list] [network] Nucleotide excision repair (42 genes)
cre03460 [list] [network] Fanconi anemia pathway (16 genes)
GO BP
GO:1901255 [list] [network] nucleotide-excision repair involved in interstrand cross-link repair  (1 genes)  IEA  
GO:0000712 [list] [network] resolution of meiotic recombination intermediates  (4 genes)  IEA  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (82 genes)  IEA  
GO CC
GO:0000110 [list] [network] nucleotide-excision repair factor 1 complex  (2 genes)  IEA  
GO MF
GO:0000014 [list] [network] single-stranded DNA endodeoxyribonuclease activity  (2 genes)  IEA  
GO:0003684 [list] [network] damaged DNA binding  (27 genes)  IEA  
GO:0003697 [list] [network] single-stranded DNA binding  (46 genes)  IEA  
Protein XP_042924507.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  pero 1,  chlo 1,  cysk 1,  golg 1  (predict for XP_042924507.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042924507.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_06g311400v5

.
ath-u.5
for
UVH1

.
gma-u.5
for
100812359

.
sly-u.5
for
101249845

.
osa-u.5
for
4331279

.
zma-u.5
for
100192883

.
vvi-u.5
for
100247853

.
ppo-u.5
for
18094546

.
mtr-u.5
for
11442992

.


Ortholog ID: 11431
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol UVH1 LOC100812359 LOC101249845 LOC4331279 LOC100192883 LOC103864059 LOC100247853 LOC18094546 LOC11442992 LOC123099175 LOC123093980 LOC123450086 LOC107919892 LOC107886412 LOC106446208 LOC106435272 CHLRE_06g311400v5 LOC8059542 LOC102590040 LOC102624221 LOC100820951 LOC107810733 LOC107787518
Function* Restriction endonuclease, type II-like superfamily protein DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 RAD1 DNA repair protein homolog DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1-like DNA repair endonuclease UVH1 uncharacterized protein DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1 DNA repair endonuclease UVH1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03420 Nucleotide excision repair 2
ath04142 Lysosome 2
ath03083 Polycomb repressive complex 2
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03420 Nucleotide excision repair 2
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03420 Nucleotide excision repair 3
zma03040 Spliceosome 2
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03013 Nucleocytoplasmic transport 3
ppo03022 Basal transcription factors 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 5
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 7
bna03420 Nucleotide excision repair 6
bna03460 Fanconi anemia pathway 4
bna04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 7
bna03420 Nucleotide excision repair 6
bna03460 Fanconi anemia pathway 4
bna04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 3
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
nta03420 Nucleotide excision repair 2
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834117 100812359 101249845 4331279 100192883 103864059 100247853 18094546 11442992 123099175 123093980 123450086 107919892 107886412 106446208 106435272 5716786 8059542 102590040 102624221 100820951 107810733 107787518
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