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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  107886587  increased DNA methylation 1 
 ghi-r.1  107935657  increased DNA methylation 1 
 ghi-r.1  107920662  increased DNA methylation 1 
 ghi-r.1  107895236  increased DNA methylation 1 
 ath-u.5  ROS4  Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein 
 bra-r.6  103869966  increased DNA methylation 1 
 bna-r.1  125609046  increased DNA methylation 1-like 
 bna-r.1  106423565  increased DNA methylation 1-like 
 bna-r.1  106401344  increased DNA methylation 1 
 cit-r.1  102626084  increased DNA methylation 1 
 gma-u.5  100795889  increased DNA methylation 1 
 gma-u.5  100777440  increased DNA methylation 1 
 vvi-u.5  100248637  increased DNA methylation 1 
 ppo-u.5  18095506  increased DNA methylation 1 
 mtr-u.5  25487250  increased DNA methylation 1 
 sly-u.5  101265659  increased DNA methylation 1 
 sot-r.1  102603955  increased DNA methylation 1 
 nta-r.1  107809224  increased DNA methylation 1 
 nta-r.1  107782448  increased DNA methylation 1 
 osa-u.5  4337507  increased DNA methylation 1 
 zma-u.5  103642225  Increased DNA methylation 1 
 tae-r.2  123191232  uncharacterized LOC123191232 
 tae-r.2  123055408  uncharacterized LOC123055408 
 tae-r.2  123047599  uncharacterized LOC123047599 
 hvu-r.1  123428551  increased DNA methylation 1-like 
 sbi-r.1  8064298  increased DNA methylation 1 
 bdi-r.1  100839049  uncharacterized LOC100839049 

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Top 50 coexpressed genes to 107886587 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107886587 (ghi-r.1 coexpression data)

CoexMap"107886587"


ghiLOC107886587 | Entrez gene ID : 107886587
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 3 1 2 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0016747 [list] [network] acyltransferase activity, transferring groups other than amino-acyl groups  (763 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (4831 genes)  IEA  
Protein XP_016666087.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  vacu 1  (predict for XP_016666087.2)
Subcellular
localization
TargetP
other 8  (predict for XP_016666087.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
107886587


ghi-r.1
for
107935657


ghi-r.1
for
107920662


ghi-r.1
for
107895236


ath-u.5
for
ROS4


bra-r.6
for
103869966


bna-r.1
for
125609046


bna-r.1
for
106423565


bna-r.1
for
106401344


cit-r.1
for
102626084


gma-u.5
for
100795889


gma-u.5
for
100777440


vvi-u.5
for
100248637


ppo-u.5
for
18095506


mtr-u.5
for
25487250


sly-u.5
for
101265659


sot-r.1
for
102603955


nta-r.1
for
107809224


nta-r.1
for
107782448


osa-u.5
for
4337507


zma-u.5
for
103642225


tae-r.2
for
123191232


tae-r.2
for
123055408


tae-r.2
for
123047599


hvu-r.1
for
123428551


sbi-r.1
for
8064298


bdi-r.1
for
100839049



Ortholog ID: 8458
Species ghi ghi ghi ath bra bna bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC107935657 LOC107920662 LOC107895236 ROS4 LOC103869966 LOC125609046 LOC106423565 LOC106401344 LOC102626084 LOC100795889 LOC100777440 LOC100248637 LOC18095506 LOC25487250 LOC101265659 LOC102603955 LOC107809224 LOC107782448 LOC4337507 LOC103642225 LOC123191232 LOC123055408 LOC123047599 LOC123428551 LOC8064298 LOC100839049
Function* increased DNA methylation 1 increased DNA methylation 1 increased DNA methylation 1 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein increased DNA methylation 1 increased DNA methylation 1-like increased DNA methylation 1-like increased DNA methylation 1 increased DNA methylation 1 increased DNA methylation 1 increased DNA methylation 1 increased DNA methylation 1 increased DNA methylation 1 increased DNA methylation 1 increased DNA methylation 1 increased DNA methylation 1 increased DNA methylation 1 increased DNA methylation 1 increased DNA methylation 1 Increased DNA methylation 1 uncharacterized LOC123191232 uncharacterized LOC123055408 uncharacterized LOC123047599 increased DNA methylation 1-like increased DNA methylation 1 uncharacterized LOC100839049
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00340 Histidine metabolism 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107935657 107920662 107895236 820727 103869966 125609046 106423565 106401344 102626084 100795889 100777440 100248637 18095506 25487250 101265659 102603955 107809224 107782448 4337507 103642225 123191232 123055408 123047599 123428551 8064298 100839049
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