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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107887593   pentatricopeptide repeat-containing protein At5g61990, mitochondrial-like 
 ath-u.5   AT5G61990   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100251738   pentatricopeptide repeat-containing protein At5g61990, mitochondrial 
 vvi-u.5   100245882   pentatricopeptide repeat-containing protein At5g61990, mitochondrial 
 ppo-u.5   7457577   pentatricopeptide repeat-containing protein At5g61990, mitochondrial 
 sly-u.5   101265045   pentatricopeptide repeat-containing protein At5g61990, mitochondrial-like 
 sly-u.5   101246618   pentatricopeptide repeat-containing protein At5g61990, mitochondrial 

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Top 50 coexpressed genes to 107887593 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107887593 (ghi-r.1 coexpression data)

CoexMap"107887593"


ghiLOC107887593 | Entrez gene ID : 107887593    
Species ghi ath vvi ppo sly hvu zma bna cit bra osa mtr sbi bdi nta gma tae cre sot
Paralog 1 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein NP_001313672.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo_mito 5,  chlo 4  (predict for NP_001313672.2)
Subcellular
localization
TargetP
mito 9  (predict for NP_001313672.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107887593
ath-u.5
for
AT5G61990
vvi-u.5
for
100251738
vvi-u.5
for
100245882
ppo-u.5
for
7457577
sly-u.5
for
101265045
sly-u.5
for
101246618


Ortholog ID: 11010
Species ghi ghi ath bra bna bna cit cit vvi vvi ppo sly sly sot sot nta nta sbi bdi
Symbol LOC107949633 LOC107887593 AT5G61990 LOC103874637 LOC125583975 LOC106421952 LOC102613026 LOC102623075 LOC100251738 LOC100245882 LOC7457577 LOC101265045 LOC101246618 LOC102582022 LOC102597773 LOC107765594 LOC107800519 LOC8063807 LOC100831881
Function* pentatricopeptide repeat-containing protein At5g61990, mitochondrial pentatricopeptide repeat-containing protein At5g61990, mitochondrial-like Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g61990, mitochondrial pentatricopeptide repeat-containing protein At5g61990, mitochondrial-like pentatricopeptide repeat-containing protein At5g61990, mitochondrial pentatricopeptide repeat-containing protein At5g61990, mitochondrial-like pentatricopeptide repeat-containing protein At5g61990, mitochondrial-like pentatricopeptide repeat-containing protein At5g61990, mitochondrial pentatricopeptide repeat-containing protein At5g61990, mitochondrial pentatricopeptide repeat-containing protein At5g61990, mitochondrial pentatricopeptide repeat-containing protein At5g61990, mitochondrial-like pentatricopeptide repeat-containing protein At5g61990, mitochondrial pentatricopeptide repeat-containing protein At5g61990, mitochondrial pentatricopeptide repeat-containing protein At5g61990, mitochondrial-like uncharacterized LOC107765594 uncharacterized LOC107800519 pentatricopeptide repeat-containing protein At1g62910 pentatricopeptide repeat-containing protein At1g63330
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 3
nta03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 2
bdi00010 Glycolysis / Gluconeogenesis 2
bdi00620 Pyruvate metabolism 2
bdi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107949633 107887593 836320 103874637 125583975 106421952 102613026 102623075 100251738 100245882 7457577 101265045 101246618 102582022 102597773 107765594 107800519 8063807 100831881
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