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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107888533   nuclear transport factor 2 
 ghi-r.1   107946550   nuclear transport factor 2 
 ghi-r.1   107941344   nuclear transport factor 2 
 ghi-r.1   107940136   nuclear transport factor 2 
 ath-u.5   AT2G03640   Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein 
 ath-u.5   AT3G25150   Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein 
 ath-u.5   AT5G43960   Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein 
 bra-r.6   103839214   nuclear transport factor 2 
 bra-r.6   103854928   nuclear transport factor 2 
 bra-r.6   103860560   nuclear transport factor 2 
 bna-r.1   111210019   nuclear transport factor 2-like 
 bna-r.1   106382190   nuclear transport factor 2 
 bna-r.1   125609828   nuclear transport factor 2-like 
 cit-r.1   102609497   nuclear transport factor 2-like 
 cit-r.1   102613965   nuclear transport factor 2 
 gma-u.5   100805610   nuclear transport factor 2 
 gma-u.5   100812165   nuclear transport factor 2 
 gma-u.5   100816288   nuclear transport factor 2 
 vvi-u.5   100249710   nuclear transport factor 2 
 vvi-u.5   100250757   nuclear transport factor 2 
 vvi-u.5   100255231   nuclear transport factor 2 
 ppo-u.5   7498214   nuclear transport factor 2 
 ppo-u.5   7475423   nuclear transport factor 2 
 mtr-u.5   11431097   nuclear transport factor 2 
 mtr-u.5   11446183   nuclear transport factor 2 
 mtr-u.5   11446469   nuclear transport factor 2 
 sly-u.5   101250028   nuclear transport factor 2 
 sly-u.5   101245798   nuclear transport factor 2 
 sot-r.1   102594129   putative G3BP-like protein 
 sot-r.1   102582243   putative G3BP-like protein 
 sot-r.1   102580874   putative G3BP-like protein 
 nta-r.1   107788677   nuclear transport factor 2-like 
 nta-r.1   107792292   nuclear transport factor 2 
 nta-r.1   107781059   nuclear transport factor 2-like 
 osa-u.5   4343835   nuclear transport factor 2 
 osa-u.5   4335600   nuclear transport factor 2 
 osa-u.5   4333125   nuclear transport factor 2 
 zma-u.5   100382927   uncharacterized LOC100382927 
 zma-u.5   100284101   uncharacterized LOC100284101 
 zma-u.5   100282288   uncharacterized LOC100282288 
 tae-r.2   123156105   nuclear transport factor 2 
 hvu-r.1   123445065   nuclear transport factor 2-like 
 hvu-r.1   123429718   nuclear transport factor 2-like 
 hvu-r.1   123426482   nuclear transport factor 2-like 
 sbi-r.1   110432942   ras GTPase-activating protein-binding protein 2 
 sbi-r.1   8066039   ras GTPase-activating protein-binding protein 1 
 sbi-r.1   8069463   ras GTPase-activating protein-binding protein 1 
 bdi-r.1   100842774   ras GTPase-activating protein-binding protein 1 
 bdi-r.1   100824546   putative G3BP-like protein 
 bdi-r.1   100844531   putative G3BP-like protein 
 cre-r.1   CHLRE_02g092400v5   uncharacterized protein 

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Top 50 coexpressed genes to 107888533 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107888533 (ghi-r.1 coexpression data)

CoexMap"107888533"


ghiLOC107888533 | Entrez gene ID : 107888533    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 2 3 3 2 3 2 3 3 3 3 1 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (1534 genes)  IEA  
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (890 genes)  IEA  
Protein XP_016668165.1 [sequence] [blastp]
XP_016668166.1 [sequence] [blastp]
XP_040933546.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  cyto 2,  nucl 1,  cyto_E.R. 1  (predict for XP_016668165.1)
chlo 5,  cyto 2,  nucl 1,  cyto_E.R. 1  (predict for XP_016668166.1)
chlo 5,  cyto 2,  nucl 1,  cyto_E.R. 1  (predict for XP_040933546.1)
Subcellular
localization
TargetP
other 6  (predict for XP_016668165.1)
other 6  (predict for XP_016668166.1)
other 6  (predict for XP_040933546.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107888533
ghi-r.1
for
107946550
ghi-r.1
for
107941344
ghi-r.1
for
107940136
ath-u.5
for
AT2G03640
ath-u.5
for
AT3G25150
ath-u.5
for
AT5G43960
bra-r.6
for
103839214
bra-r.6
for
103854928
bra-r.6
for
103860560
bna-r.1
for
111210019
bna-r.1
for
106382190
bna-r.1
for
125609828
cit-r.1
for
102609497
cit-r.1
for
102613965
gma-u.5
for
100805610
gma-u.5
for
100812165
gma-u.5
for
100816288
vvi-u.5
for
100249710
vvi-u.5
for
100250757
vvi-u.5
for
100255231
ppo-u.5
for
7498214
ppo-u.5
for
7475423
mtr-u.5
for
11431097
mtr-u.5
for
11446183
mtr-u.5
for
11446469
sly-u.5
for
101250028
sly-u.5
for
101245798
sot-r.1
for
102594129
sot-r.1
for
102582243
sot-r.1
for
102580874
nta-r.1
for
107788677
nta-r.1
for
107792292
nta-r.1
for
107781059
osa-u.5
for
4343835
osa-u.5
for
4335600
osa-u.5
for
4333125
zma-u.5
for
100382927
zma-u.5
for
100284101
zma-u.5
for
100282288
tae-r.2
for
123156105
hvu-r.1
for
123445065
hvu-r.1
for
123429718
hvu-r.1
for
123426482
sbi-r.1
for
110432942
sbi-r.1
for
8066039
sbi-r.1
for
8069463
bdi-r.1
for
100842774
bdi-r.1
for
100824546
bdi-r.1
for
100844531
cre-r.1
for
CHLRE_02g092400v5


Ortholog ID: 346
Species ghi ghi ghi ath ath ath bra bra bra bna bna cit cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC107932166 LOC107886607 LOC107961363 AT2G03640 AT3G25150 AT1G13730 LOC103854928 LOC103875395 LOC103872075 LOC111210019 LOC106439954 LOC102609497 LOC102628136 LOC102614075 LOC100817177 LOC100783698 LOC100795457 LOC100249710 LOC100261382 LOC100264206 LOC7471164 LOC7468147 LOC7467902 LOC11446183 LOC25493895 LOC25498406 LOC101245491 LOC101259102 LOC101265248 LOC102594129 LOC102580874 LOC102583564 LOC107788677 LOC107813212 LOC107829551 LOC4343835 LOC4333125 LOC4328199 LOC100282288 LOC103636080 LOC100193813 LOC123164709 LOC123053095 LOC123189003 LOC123445065 LOC123429718 LOC123406987 LOC110432942 LOC8066039 LOC8069463 LOC100842774 LOC100824546 LOC100845318 CHLRE_02g092400v5
Function* nuclear transport factor 2 nuclear transport factor 2 nuclear transport factor 2 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein nuclear transport factor 2 nuclear transport factor 2 nuclear transport factor 2 nuclear transport factor 2-like nuclear transport factor 2 nuclear transport factor 2-like nuclear transport factor 2 nuclear transport factor 2 nuclear transport factor 2 nuclear transport factor 2 putative G3BP-like protein-like nuclear transport factor 2 nuclear transport factor 2 nuclear transport factor 2 nuclear transport factor 2 nuclear transport factor 2 nuclear transport factor 2 nuclear transport factor 2 nuclear transport factor 2 nuclear transport factor 2 nuclear transport factor 2 nuclear transport factor 2-like nuclear transport factor 2 putative G3BP-like protein putative G3BP-like protein ras GTPase-activating protein-binding protein 2-like nuclear transport factor 2-like nuclear transport factor 2 nuclear transport factor 2-like nuclear transport factor 2 nuclear transport factor 2 nuclear transport factor 2 uncharacterized LOC100282288 uncharacterized LOC103636080 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain nuclear transport factor 2 nuclear transport factor 2 nuclear transport factor 2 nuclear transport factor 2-like nuclear transport factor 2-like nuclear transport factor 2 ras GTPase-activating protein-binding protein 2 ras GTPase-activating protein-binding protein 1 ras GTPase-activating protein-binding protein 1 ras GTPase-activating protein-binding protein 1 putative G3BP-like protein ras GTPase-activating protein-binding protein 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
ath03015 mRNA surveillance pathway 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 3
ath03030 DNA replication 2
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma03013 Nucleocytoplasmic transport 2
gma03250 Viral life cycle - HIV-1 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 5
vvi00970 Aminoacyl-tRNA biosynthesis 2
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
ppo04145 Phagosome 2
ppo04517 IgSF CAM signaling 2
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 4
sly00510 N-Glycan biosynthesis 3
sly00513 Various types of N-glycan biosynthesis 2
sly04144 Endocytosis 2
sly05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
sot00190 Oxidative phosphorylation 2
sot03015 mRNA surveillance pathway 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 2
sot04142 Lysosome 2
sot04145 Phagosome 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 9
nta04130 SNARE interactions in vesicular transport 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00020 Citrate cycle (TCA cycle) 2
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00100 Steroid biosynthesis 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae04145 Phagosome 2
tae04517 IgSF CAM signaling 2
tae04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03060 Protein export 2
hvu04141 Protein processing in endoplasmic reticulum 2
hvu03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi03018 RNA degradation 2
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 4
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 4
cre00970 Aminoacyl-tRNA biosynthesis 3
cre03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107932166 107886607 107961363 814893 822106 837933 103854928 103875395 103872075 111210019 106439954 102609497 102628136 102614075 100817177 100783698 100795457 100249710 100261382 100264206 7471164 7468147 7467902 11446183 25493895 25498406 101245491 101259102 101265248 102594129 102580874 102583564 107788677 107813212 107829551 4343835 4333125 4328199 100282288 103636080 100193813 123164709 123053095 123189003 123445065 123429718 123406987 110432942 8066039 8069463 100842774 100824546 100845318 5727499
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