ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107888669	glutaredoxin
ath-u.5	AT5G20500	Glutaredoxin family protein
ath-u.5	GRXC2	Glutaredoxin family protein
ath-u.5	GRXC1	Thioredoxin superfamily protein
gma-u.5	100305517	uncharacterized LOC100305517
gma-u.5	100500348	uncharacterized LOC100500348
gma-u.5	100305955	glutaredoxin family protein
vvi-u.5	100241059	glutaredoxin-C4
vvi-u.5	100241967	glutaredoxin-C3
vvi-u.5	100260385	glutaredoxin
ppo-u.5	7484039	glutaredoxin-C4
ppo-u.5	7495519	glutaredoxin-C3
ppo-u.5	7496831	glutaredoxin
mtr-u.5	11438755	glutaredoxin-C4
mtr-u.5	11430185	glutaredoxin
mtr-u.5	11408074	glutaredoxin-C3
sly-u.5	101268063	glutaredoxin-C4
sly-u.5	101247085	glutaredoxin-C3
sly-u.5	544298	glutaredoxin
osa-u.5	4341733	glutaredoxin-C8-like
osa-u.5	4330145	monothiol glutaredoxin-S6-like
zma-u.5	100303864	Grx_C2.1 - glutaredoxin subgroup I
zma-u.5	100282495	Grx_C4 - glutaredoxin subgroup I

Annotation

functional annotation

KEGG

GO BP

GO:0034599 [list] [network] cellular response to oxidative stress

(77 genes)

IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(13864 genes)

IEA

GO MF

GO:0015038 [list] [network] glutathione disulfide oxidoreductase activity

(24 genes)

IEA

Protein

XP_016668328.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, cyto 2, extr 2, chlo_mito 2

(predict for XP_016668328.1)

Subcellular
localization
TargetP

scret 6, other 5

(predict for XP_016668328.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107888669	ath-u.5 for AT5G20500	ath-u.5 for GRXC2	ath-u.5 for GRXC1	gma-u.5 for 100305517	gma-u.5 for 100500348	gma-u.5 for 100305955	vvi-u.5 for 100241059	vvi-u.5 for 100241967	vvi-u.5 for 100260385	ppo-u.5 for 7484039	ppo-u.5 for 7495519	ppo-u.5 for 7496831	mtr-u.5 for 11438755	mtr-u.5 for 11430185	mtr-u.5 for 11408074	sly-u.5 for 101268063	sly-u.5 for 101247085	sly-u.5 for 544298	osa-u.5 for 4341733	osa-u.5 for 4330145	zma-u.5 for 100303864	zma-u.5 for 100282495

Ortholog

Ortholog ID: 816

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

GRXC1

Function^*

glutaredoxin-C4

glutaredoxin-C3

Glutaredoxin family protein

Thioredoxin superfamily protein

glutaredoxin-C1

glutaredoxin-C4

glutaredoxin-C1-like

glutaredoxin-C2

glutaredoxin-C3

uncharacterized LOC100527634

glutaredoxin family protein

glutaredoxin

glutaredoxin-C3

glutaredoxin

glutaredoxin-C4-like

uncharacterized LOC107784788

glutaredoxin-C4, chloroplastic-like

monothiol glutaredoxin-S6-like

Grx_C4 - glutaredoxin subgroup I

glutaredoxin-C8

glutaredoxin-C6-like

glutaredoxin-C4, chloroplastic

glutaredoxin-C8

monothiol glutaredoxin-S6

glutaredoxin-C6

uncharacterized protein

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00051	Fructose and mannose metabolism	2
ghi00562	Inositol phosphate metabolism	2
ghi00710	Carbon fixation by Calvin cycle	2
ghi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01240	Biosynthesis of cofactors	3
ghi00750	Vitamin B6 metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00480	Glutathione metabolism	4
ath00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00071	Fatty acid degradation	4
bra01212	Fatty acid metabolism	4
bra00410	beta-Alanine metabolism	2
bra01200	Carbon metabolism	2
bra00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	4
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	3
bna00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	6
cit03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	4
gma03060	Protein export	3
gma00230	Purine metabolism	2
gma01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	6
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	2
ppo03040	Spliceosome	2
ppo00480	Glutathione metabolism	2
ppo00280	Valine, leucine and isoleucine degradation	2
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03050	Proteasome	6
sly00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04712	Circadian rhythm - plant	3
osa00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	4
osa03060	Protein export	3
osa04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	7
zma04145	Phagosome	7
zma04142	Lysosome	3
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	3
hvu04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	4
sbi00520	Amino sugar and nucleotide sugar metabolism	2
sbi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00010	Glycolysis / Gluconeogenesis	10
bdi01200	Carbon metabolism	10
bdi01230	Biosynthesis of amino acids	10
bdi00710	Carbon fixation by Calvin cycle	7
bdi00051	Fructose and mannose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00195	Photosynthesis	4
cre03010	Ribosome	3
cre00710	Carbon fixation by Calvin cycle	2
cre01200	Carbon metabolism	2
cre00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03420	Nucleotide excision repair	3
cre03020	RNA polymerase	2
cre04120	Ubiquitin mediated proteolysis	2
cre04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

107897861

107897612

844073

836423

103837443

103845670

106422799

106446144

102626837

100527634

100305955

100260385

100241967

7495519

7496831

11430185

11438922

544298

101254986

102597992

107784219

107784788

4329999

4330145

100282495

123157506

123149342

123427207

8072478

8058458

100835637

100832099

5728538

5719651

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107888669 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107888669 (ghi-r.1 coexpression data)


Species	ghi	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	sot	nta	cre	tae
Paralog	1	3	3	3	3	3	3	2	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107888669 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107888669 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**