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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107888670   tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A 
 ghi-r.1   107892271   tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A 
 ath-u.5   AT5G14600   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 bra-r.6   103846476   tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A 
 bna-r.1   106418407   tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A 
 bna-r.1   106372104   tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like 
 cit-r.1   102630311   uncharacterized LOC102630311 
 gma-u.5   100793069   tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A 
 gma-u.5   102665775   tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A 
 vvi-u.5   100242193   uncharacterized LOC100242193 
 ppo-u.5   112324948   uncharacterized LOC112324948 
 mtr-u.5   25496409   tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A 
 sly-u.5   101255549   uncharacterized LOC101255549 
 sot-r.1   102597671   tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A 
 nta-r.1   107763321   uncharacterized LOC107763321 
 nta-r.1   107809273   uncharacterized LOC107809273 
 osa-u.5   4335469   uncharacterized LOC4335469 
 osa-u.5   4335490   uncharacterized LOC4335490 
 zma-u.5   100273802   tRNA methyltransferase catalytic subunit TRM61 
 tae-r.2   123045217   tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trmt61a 
 tae-r.2   123053052   tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trmt61a 
 tae-r.2   123188965   tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A 
 hvu-r.1   123426440   tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A 
 sbi-r.1   8066599   tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A 
 bdi-r.1   100827733   tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A 
 cre-r.1   CHLRE_05g244236v5   uncharacterized protein 

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Top 50 coexpressed genes to 107888670 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107888670 (ghi-r.1 coexpression data)

CoexMap"107888670"


ghiLOC107888670 | Entrez gene ID : 107888670    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 2 1 1 1 1 1 2 2 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030488 [list] [network] tRNA methylation  (58 genes)  IEA  
GO CC
GO:0031515 [list] [network] tRNA (m1A) methyltransferase complex  (11 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0160107 [list] [network] tRNA (adenine(58)-N1)-methyltransferase activity  (9 genes)  IEA  
Protein XP_016668329.1 [sequence] [blastp]
XP_016668330.1 [sequence] [blastp]
XP_040933442.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 3,  cyto 2,  mito 1,  extr 1,  vacu 1  (predict for XP_016668329.1)
chlo 3,  nucl 3,  cyto 2,  mito 1,  extr 1,  vacu 1  (predict for XP_016668330.1)
chlo 3,  nucl 3,  cyto 2,  mito 1,  extr 1,  vacu 1  (predict for XP_040933442.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016668329.1)
other 8  (predict for XP_016668330.1)
other 8  (predict for XP_040933442.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107888670
ghi-r.1
for
107892271
ath-u.5
for
AT5G14600
bra-r.6
for
103846476
bna-r.1
for
106418407
bna-r.1
for
106372104
cit-r.1
for
102630311
gma-u.5
for
100793069
gma-u.5
for
102665775
vvi-u.5
for
100242193
ppo-u.5
for
112324948
mtr-u.5
for
25496409
sly-u.5
for
101255549
sot-r.1
for
102597671
nta-r.1
for
107763321
nta-r.1
for
107809273
osa-u.5
for
4335469
osa-u.5
for
4335490
zma-u.5
for
100273802
tae-r.2
for
123045217
tae-r.2
for
123053052
tae-r.2
for
123188965
hvu-r.1
for
123426440
sbi-r.1
for
8066599
bdi-r.1
for
100827733
cre-r.1
for
CHLRE_05g244236v5


Ortholog ID: 8598
Species ghi ghi ath bra bna bna cit gma gma vvi ppo mtr sly sot nta nta osa osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107888670 LOC107892271 AT5G14600 LOC103846476 LOC106418407 LOC106372104 LOC102630311 LOC100793069 LOC102665775 LOC100242193 LOC112324948 LOC25496409 LOC101255549 LOC102597671 LOC107763321 LOC107809273 LOC4335469 LOC4335490 LOC100273802 LOC123045217 LOC123053052 LOC123188965 LOC123426440 LOC8066599 LOC100827733 CHLRE_05g244236v5
Function* tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A S-adenosyl-L-methionine-dependent methyltransferases superfamily protein tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like uncharacterized LOC102630311 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A uncharacterized LOC100242193 uncharacterized LOC112324948 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A uncharacterized LOC101255549 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A uncharacterized LOC107763321 uncharacterized LOC107809273 uncharacterized LOC4335469 uncharacterized LOC4335490 tRNA methyltransferase catalytic subunit TRM61 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trmt61a tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trmt61a tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 3
ghi03020 RNA polymerase 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
bra00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 4
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot03013 Nucleocytoplasmic transport 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 4
zma03015 mRNA surveillance pathway 3
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae04626 Plant-pathogen interaction 3
tae00230 Purine metabolism 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107888670 107892271 831312 103846476 106418407 106372104 102630311 100793069 102665775 100242193 112324948 25496409 101255549 102597671 107763321 107809273 4335469 4335490 100273802 123045217 123053052 123188965 123426440 8066599 100827733 5726290
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