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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_05g244236v5   uncharacterized protein 
 ath-u.5   AT5G14600   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 gma-u.5   102665775   tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A 
 gma-u.5   100793069   tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A 
 sly-u.5   101255549   uncharacterized LOC101255549 
 osa-u.5   4335490   uncharacterized LOC4335490 
 osa-u.5   4335469   uncharacterized LOC4335469 
 zma-u.5   100273802   tRNA methyltransferase catalytic subunit TRM61 
 vvi-u.5   100242193   uncharacterized LOC100242193 
 ppo-u.5   112324948   uncharacterized LOC112324948 
 mtr-u.5   25496409   tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A 

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Top 50 coexpressed genes to CHLRE_05g244236v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_05g244236v5 (cre-r.1 coexpression data)

CoexMap"5726290"


creCHLRE_05g244236v5 | Entrez gene ID : 5726290    
Species cre ath gma sly osa zma vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi sbi
Paralog 1 1 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030488 [list] [network] tRNA methylation  (34 genes)  IEA  
GO CC
GO:0031515 [list] [network] tRNA (m1A) methyltransferase complex  (2 genes)  IEA  
GO:0005634 [list] [network] nucleus  (1576 genes)  IEA  
GO MF
Protein XP_042924672.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  pero 4,  cyto_pero 4  (predict for XP_042924672.1)
Subcellular
localization
TargetP
other 9  (predict for XP_042924672.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_05g244236v5

.
ath-u.5
for
AT5G14600

.
gma-u.5
for
102665775

.
gma-u.5
for
100793069

.
sly-u.5
for
101255549

.
osa-u.5
for
4335490

.
osa-u.5
for
4335469

.
zma-u.5
for
100273802

.
vvi-u.5
for
100242193

.
ppo-u.5
for
112324948

.
mtr-u.5
for
25496409

.


Ortholog ID: 8598
Species ath gma gma sly osa osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT5G14600 LOC102665775 LOC100793069 LOC101255549 LOC4335469 LOC4335490 LOC100273802 LOC103846476 LOC100242193 LOC112324948 LOC25496409 LOC123045217 LOC123188965 LOC123426440 LOC107888670 LOC107892271 LOC106372104 LOC106418407 CHLRE_05g244236v5 LOC8066599 LOC102597671 LOC102630311 LOC100827733 LOC107763321 LOC107809273
Function* S-adenosyl-L-methionine-dependent methyltransferases superfamily protein tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A uncharacterized LOC101255549 uncharacterized LOC4335469 uncharacterized LOC4335490 tRNA methyltransferase catalytic subunit TRM61 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A uncharacterized LOC100242193 uncharacterized LOC112324948 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit trmt61a tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A uncharacterized protein tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A uncharacterized LOC102630311 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A uncharacterized LOC107763321 uncharacterized LOC107809273
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 4
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 4
zma03015 mRNA surveillance pathway 3
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
bra00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae04626 Plant-pathogen interaction 3
tae00230 Purine metabolism 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 3
ghi03020 RNA polymerase 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot03013 Nucleocytoplasmic transport 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831312 102665775 100793069 101255549 4335469 4335490 100273802 103846476 100242193 112324948 25496409 123045217 123188965 123426440 107888670 107892271 106372104 106418407 5726290 8066599 102597671 102630311 100827733 107763321 107809273
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