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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107889261   COP9 signalosome complex subunit 2 
 ghi-r.1   107891480   COP9 signalosome complex subunit 2 
 ghi-r.1   107953235   COP9 signalosome complex subunit 2 
 ghi-r.1   107954342   COP9 signalosome complex subunit 2 
 ath-u.5   FUS12   proteasome family protein 
 bra-r.6   103829642   COP9 signalosome complex subunit 2 
 bra-r.6   103858338   COP9 signalosome complex subunit 2 
 bna-r.1   106438415   COP9 signalosome complex subunit 2 
 bna-r.1   106396476   COP9 signalosome complex subunit 2 
 bna-r.1   106388399   COP9 signalosome complex subunit 2 
 cit-r.1   102617735   COP9 signalosome complex subunit 2 
 gma-u.5   100818784   COP9 signalosome complex subunit 2 
 gma-u.5   100788070   COP9 signalosome complex subunit 2 
 gma-u.5   100787019   COP9 signalosome complex subunit 2 
 vvi-u.5   100256855   COP9 signalosome complex subunit 2 
 ppo-u.5   18094947   COP9 signalosome complex subunit 2 
 ppo-u.5   7488179   COP9 signalosome complex subunit 2 
 mtr-u.5   11443010   COP9 signalosome complex subunit 2 
 sly-u.5   101258618   COP9 signalosome complex subunit 2 
 sly-u.5   101258397   COP9 signalosome complex subunit 2 
 sly-u.5   101253844   COP9 signalosome complex subunit 2 
 sot-r.1   102578848   COP9 signalosome complex subunit 2-like 
 sot-r.1   102580660   COP9 signalosome complex subunit 2-like 
 sot-r.1   102593504   COP9 signalosome complex subunit 2 
 nta-r.1   107807237   COP9 signalosome complex subunit 2 
 nta-r.1   107784887   COP9 signalosome complex subunit 2 
 nta-r.1   107767670   COP9 signalosome complex subunit 2 
 osa-u.5   4326902   COP9 signalosome complex subunit 2 
 zma-u.5   103634653   COP9 signalosome complex subunit 2 
 zma-u.5   100283498   COP9 signalosome complex subunit 2 
 tae-r.2   123061129   COP9 signalosome complex subunit 2 
 tae-r.2   123069709   COP9 signalosome complex subunit 2 
 tae-r.2   123078197   COP9 signalosome complex subunit 2 
 hvu-r.1   123443541   COP9 signalosome complex subunit 2 
 sbi-r.1   8074543   COP9 signalosome complex subunit 2 
 bdi-r.1   100836634   COP9 signalosome complex subunit 2 
 cre-r.1   CHLRE_01g030800v5   uncharacterized protein 

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Top 50 coexpressed genes to 107889261 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107889261 (ghi-r.1 coexpression data)

CoexMap"107889261"


ghiLOC107889261 | Entrez gene ID : 107889261    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 3 1 3 1 2 1 3 3 3 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000338 [list] [network] protein deneddylation  (17 genes)  IEA  
GO CC
GO:0008180 [list] [network] COP9 signalosome  (38 genes)  IEA  
GO MF
Protein XP_016669113.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4  (predict for XP_016669113.2)
Subcellular
localization
TargetP
other 9  (predict for XP_016669113.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107889261
ghi-r.1
for
107891480
ghi-r.1
for
107953235
ghi-r.1
for
107954342
ath-u.5
for
FUS12
bra-r.6
for
103829642
bra-r.6
for
103858338
bna-r.1
for
106438415
bna-r.1
for
106396476
bna-r.1
for
106388399
cit-r.1
for
102617735
gma-u.5
for
100818784
gma-u.5
for
100788070
gma-u.5
for
100787019
vvi-u.5
for
100256855
ppo-u.5
for
18094947
ppo-u.5
for
7488179
mtr-u.5
for
11443010
sly-u.5
for
101258618
sly-u.5
for
101258397
sly-u.5
for
101253844
sot-r.1
for
102578848
sot-r.1
for
102580660
sot-r.1
for
102593504
nta-r.1
for
107807237
nta-r.1
for
107784887
nta-r.1
for
107767670
osa-u.5
for
4326902
zma-u.5
for
103634653
zma-u.5
for
100283498
tae-r.2
for
123061129
tae-r.2
for
123069709
tae-r.2
for
123078197
hvu-r.1
for
123443541
sbi-r.1
for
8074543
bdi-r.1
for
100836634
cre-r.1
for
CHLRE_01g030800v5


Ortholog ID: 5068
Species ghi ghi ghi ath bra bra bna bna bna cit gma gma gma vvi ppo ppo mtr sly sly sly sot sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC107889261 LOC107891480 LOC107953235 FUS12 LOC103829642 LOC103858338 LOC106438415 LOC106396476 LOC106388399 LOC102617735 LOC100818784 LOC100788070 LOC100787019 LOC100256855 LOC18094947 LOC7488179 LOC11443010 LOC101258618 LOC101258397 LOC101253844 LOC102578848 LOC102580660 LOC102593504 LOC107807237 LOC107784887 LOC107767670 LOC4326902 LOC103634653 LOC100283498 LOC123061129 LOC123069709 LOC123078197 LOC123443541 LOC8074543 LOC100836634 CHLRE_01g030800v5
Function* COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 proteasome family protein COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2-like COP9 signalosome complex subunit 2-like COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 COP9 signalosome complex subunit 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 3
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi04130 SNARE interactions in vesicular transport 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 7
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 4
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra04141 Protein processing in endoplasmic reticulum 3
bra03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 3
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03060 Protein export 3
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
sot04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00450 Selenocompound metabolism 2
nta00970 Aminoacyl-tRNA biosynthesis 2
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 5
tae03013 Nucleocytoplasmic transport 4
tae03040 Spliceosome 4
tae04120 Ubiquitin mediated proteolysis 2
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 3
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107889261 107891480 107953235 817241 103829642 103858338 106438415 106396476 106388399 102617735 100818784 100788070 100787019 100256855 18094947 7488179 11443010 101258618 101258397 101253844 102578848 102580660 102593504 107807237 107784887 107767670 4326902 103634653 100283498 123061129 123069709 123078197 123443541 8074543 100836634 5715373
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